Protein Alignment Rpt2 and psmc4

DIOPT Version :9

• Sequence 1: NP_001287493.1
• Gene: Rpt2 / 42828
• FlyBaseID: FBgn0015282
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_956044.2
• Gene: psmc4 / 326884
• ZFINID: ZDB-GENE-030131-5083
• Length: 418
• Species: Danio rerio
• Alignment Length: 377
• Identity: 189/377 - (50%)
• Similarity: 283/377 - (75%)
• Gaps: 6/377 - (1%)

  Fly    63 KLERIKDYLMMEDEFIRN-QERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSV 126
            ||::..::|.:::|:|:: |:.||.:....:||..::..:   |:.:|...|.:|.|.|||.::.
Zfish    46 KLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQNTAIVGSTT 107

  Fly   127 GSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDT 191
            ||.:||.|||.:|::.|:|..||.|:...:|:|.||..:.|..:.::..::.|...|:||||:|.
Zfish   108 GSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDI 172

  Fly   192 QIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQ 256
            |.||::|:|||||||.|.|:::||.||:||::|||||.|||:||||||:.|:|.|:||||||.:|
Zfish   173 QKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237

  Fly   257 KYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSR 321
            ||||:||::||::||:|:|:||:|:|||||||:.|||:|:.:|.:||:||.:||||||:||||..
Zfish   238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQN 302

  Fly   322 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAK 386
            .:|||||||||.:||||||:||||:||||||||||.:.||.:|:..||:|.|:|:|:|.:.:...
Zfish   303 VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDLEDYVARP 367

  Fly   387 DDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKEGTPEGLY 438
            |.:|||||.:||.|||::|:||.|..|..:||:|:.::|:  ||:......|
Zfish   368 DKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVI--KKDEQEHEFY 417

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt2	NP_001287493.1	PTZ00361	1..439	CDD:185575	189/377 (50%)
psmc4	NP_956044.2	PTZ00454	34..418	CDD:240423	189/377 (50%)
		AAA	202..335	CDD:278434	91/132 (69%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.920