Protein Alignment Rpt2 and Psmc6

DIOPT Version :9

• Sequence 1: NP_001287493.1
• Gene: Rpt2 / 42828
• FlyBaseID: FBgn0015282
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_001093979.1
• Gene: Psmc6 / 289990
• RGDID: 1308825
• Length: 403
• Species: Rattus norvegicus
• Alignment Length: 395
• Identity: 162/395 - (41%)
• Similarity: 247/395 - (62%)
• Gaps: 12/395 - (3%)

  Fly    46 MKLPQVTPHTRCRLKLLKLER---IKDY--LMMEDEFIRN-----QERLKPQDEKNEEERSKVDD 100
            |.||.: |:.| ||.::...|   ::||  .::|.:.|..     :|:||...::.|:..:.:..
  Rat     1 MALPGI-PYER-RLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKA 63

  Fly   101 LRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 165
            |:.....||.:.:.:.:...||..:.|..:.|.....:||.:|:||..|.|:.....::..|..:
  Rat    64 LQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPRE 128

  Fly   166 TDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTG 230
            .||:|..|..|.....:|::||||..||:|::|.:|||||:||.::.:||.||||.:||||||||
  Rat   129 VDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTG 193

  Fly   231 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYD 295
            |||||:|||:|....||:||.|.::.||:|:..:|:||:|..|.:|.|.|:|:|||||:|.:|:.
  Rat   194 KTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 258

  Fly   296 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 360
            ..:..:||||||::|||||:||||:...||:||||||.:||||||:||||:||||...||:|:.:
  Rat   259 EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 323

  Fly   361 RRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESV 425
            ..|..||...:|...:::...::...|..:|||::.:|||||:.|:|.....|..|||.|:...|
  Rat   324 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 388

  Fly   426 LYRKK 430
            ...||
  Rat   389 ADSKK 393

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt2	NP_001287493.1	PTZ00361	1..439	CDD:185575	162/395 (41%)
Psmc6	NP_001093979.1	RPT1	18..401	CDD:224143	155/376 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920