DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and Yme1l1

DIOPT Version :10

Sequence 1:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_038799.1 Gene:Yme1l1 / 27377 MGIID:1351651 Length:715 Species:Mus musculus


Alignment Length:245 Identity:91/245 - (37%)
Similarity:145/245 - (59%) Gaps:3/245 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATF 246
            |:..:.|::...||::|.||. |.:|:.:..:|.|.|||::|.|||||||||||:|||.:....|
Mouse   279 TFEHVKGVEEAKQELQEVVEF-LKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPF 342

  Fly   247 LRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLEL 311
            ....|||..:.::|.|...:|.|||.|:.:||.::||||:|:||.||.:|..  ....::|:.:|
Mouse   343 YYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM--HPYSRQTINQL 405

  Fly   312 LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAED 376
            |.::|||.....|.:|.|||..|.||.|||||||.|.::..|.||.|.:..|...:.:::...:.
Mouse   406 LAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKS 470

  Fly   377 VNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 426
            |:...:.......|||:::.:..:|.|.|..:.:..||.::.:.||:.:|
Mouse   471 VDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKIL 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 91/245 (37%)
Yme1l1NP_038799.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..54
HflB <274..709 CDD:440233 91/245 (37%)
Blue background indicates that the domain is not in the aligned region.

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