Protein Alignment Rpt2 and Psmc4

DIOPT Version :9

• Sequence 1: NP_001287493.1
• Gene: Rpt2 / 42828
• FlyBaseID: FBgn0015282
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_036004.2
• Gene: Psmc4 / 23996
• MGIID: 1346093
• Length: 418
• Species: Mus musculus
• Alignment Length: 399
• Identity: 195/399 - (48%)
• Similarity: 290/399 - (72%)
• Gaps: 13/399 - (3%)

  Fly    41 GPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRN-QERLKPQDEKNEEERSKVDDLRGT 104
            ||:     |:.......|.|  ||::..::|.:::|:|:: |:.||.:....:||..::..:
Mouse    31 GPE-----PEDLEDLYSRYK--KLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI--- 85

  Fly   105 PMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPM 169
            |:.:|...|.:|.|.|||.::.||.:||.|||.:|::.|:|..||.|:...:|:|.||..:.|..
Mouse    86 PLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSS 150

  Fly   170 VTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 234
            :.::..::.|...||||||:|.|.||::|:|||||||.|.|:::||.||:||::|||||.|||:|
Mouse   151 IMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTML 215

  Fly   235 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG 299
            |||||:.|:|.|:||||||.:|||||:||::||::||:|:|:||:|:|||||||:.|||:|:.:|
Mouse   216 AKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG 280

  Fly   300 GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF 364
            .:||:||.:||||||:||||...:|||||||||.:||||||:||||:||||||||||.:.||.||
Mouse   281 ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIF 345

  Fly   365 TIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRK 429
            :..||:|.|:|:|:|.:.:...|.:|||||.:||.|:|::|:||.|..|..:||:|:.::|:  |
Mouse   346 STITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVI--K 408

  Fly   430 KEGTPEGLY 438
            |:......|
Mouse   409 KDEQEHEFY 417

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt2	NP_001287493.1	PTZ00361	1..439	CDD:185575	195/399 (49%)
Psmc4	NP_036004.2	PTZ00454	34..418	CDD:240423	193/391 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920