DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and Gk5

DIOPT Version :9

Sequence 1:NP_001287493.1 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001355808.1 Gene:Gk5 / 235533 MGIID:2443336 Length:534 Species:Mus musculus


Alignment Length:143 Identity:36/143 - (25%)
Similarity:52/143 - (36%) Gaps:45/143 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 GDVKVIMATNRIETLDPALIRPGRIDRKIE---FPLPDEK-----------------------TK 360
            ||||:.|.|...  ||   |..|:..:.:.   :||...|                       .|
Mouse   294 GDVKLTMGTGTF--LD---INTGKNLQHVNGGFYPLIGWKIGQELVCLAEGNAGDTGTAIMWAQK 353

  Fly   361 RRIFT--IHTSRMTLA-EDVNLSELIMAKDDLSG--ADIKAICTEAGLMALRERRMKVTNED--F 418
            ..:||  ..|.:|.|: ||   ||.:......||  |.:...|..|..|.|:..    ||:.  .
Mouse   354 LDLFTDAAETEKMALSLED---SEGVYFVPSFSGLQAPLNDPCACASFMGLKHS----TNKYHLV 411

  Fly   419 KKSKESVLYRKKE 431
            :...||:.:|.|:
Mouse   412 RAILESIAFRNKQ 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_001287493.1 PTZ00361 1..439 CDD:185575 36/143 (25%)
Gk5NP_001355808.1 FGGY_GK5_metazoa 25..527 CDD:212665 36/143 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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