DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and Katnal1

DIOPT Version :9

Sequence 1:NP_001287493.1 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_705800.1 Gene:Katnal1 / 231912 MGIID:2387638 Length:488 Species:Mus musculus


Alignment Length:261 Identity:101/261 - (38%)
Similarity:151/261 - (57%) Gaps:17/261 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 LEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPP-KGVILYGPPGTGKTLLAKAV 238
            :.:.|...:.||..|:...:.::|:|.||:..|::::  ||:.| |||::.||||||||:|||||
Mouse   197 VSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPPGTGKTMLAKAV 259

  Fly   239 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGERE 303
            |.:...||..|..|.|..||.|:..||||.||.:|..:||:.:||||||::.::|..|:   |.|
Mouse   260 ATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSD---EHE 321

  Fly   304 I-QRTMLELLNQLDGF-------DSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 360
            . :|...|||.|:||.       |....|.|:.|||....:|.||.|  |::::|..|||..|.:
Mouse   322 ASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGR 384

  Fly   361 RRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK-SKES 424
            ..:..|....:.|..||:|.::....:..|||||..||.:|.|||:|.|...::.|:.:. |||.
Mouse   385 AELLKISLREVELDPDVHLEDIADKTEGYSGADITNICRDASLMAMRRRINGLSPEEIRALSKEE 449

  Fly   425 V 425
            :
Mouse   450 L 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_001287493.1 PTZ00361 1..439 CDD:185575 101/261 (39%)
Katnal1NP_705800.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..179
SpoVK <186..481 CDD:223540 101/261 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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