DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and Psmc3

DIOPT Version :10

Sequence 1:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_032974.2 Gene:Psmc3 / 19182 MGIID:1098754 Length:442 Species:Mus musculus


Alignment Length:393 Identity:179/393 - (45%)
Similarity:259/393 - (65%) Gaps:24/393 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 RLKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIID------ 116
            |.:||..| ||   :|:.|.:|....|:...:|.:|...|:...:..|..|.|:.|::|      
Mouse    47 RTRLLDSE-IK---IMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQ 107

  Fly   117 ---------DNH-----AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 167
                     |:.     |::.||....:::.::..||.::|:||..|.:|...:.::..|..:.|
Mouse   108 EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYD 172

  Fly   168 PMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 232
            ..|..|::::.|.|.|:||||||.||||:.|::.||:.|.|.:|.:||:|||||::|||||||||
Mouse   173 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKT 237

  Fly   233 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSN 297
            |||:|.|.||.||||::.|.:|:|.::|||.||||:.|.:|:|.||||:||||:||:||||:||.
Mouse   238 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 302

  Fly   298 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 362
            ..|:||:||||||||||||||.....||||.||||::.|||||:|.||:|||||||:|:|:.:.|
Mouse   303 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARAR 367

  Fly   363 IFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLY 427
            |..||:.:|.::.|||..||....||.:||..||:|.|||::|||....::|:||:.:....|..
Mouse   368 IMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQA 432

  Fly   428 RKK 430
            :||
Mouse   433 KKK 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 179/393 (46%)
Psmc3NP_032974.2 PRK03992 42..435 CDD:179699 177/391 (45%)

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