DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and Psmc2

DIOPT Version :10

Sequence 1:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_035318.2 Gene:Psmc2 / 19181 MGIID:109555 Length:433 Species:Mus musculus


Alignment Length:459 Identity:179/459 - (38%)
Similarity:266/459 - (57%) Gaps:71/459 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GAGEKKDDKDKKKKYEPPIPTRVGKKKRRA--KGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLM 72
            ||.::|..:::|.  :.||         ||  :|..|.:|....:.::|         :||   .
Mouse     6 GADQRKTKEEEKD--DKPI---------RALDEGDIALLKTYGQSTYSR---------QIK---Q 47

  Fly    73 MEDEFIRNQERLKPQDEKNEEERSKVDDLRG--------------------------TPMSVGNL 111
            :||:.   |:.||           |:::|.|                          .|:.|...
Mouse    48 VEDDI---QQLLK-----------KINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARC 98

  Fly   112 EEII----DDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTV 172
            .:||    :|...|::....::..|.:...|....:|.|..|.::...:.:...|....||.||:
Mouse    99 TKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTM 163

  Fly   173 MKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKA 237
            |::|:.|..||:|:||...||::::|.||.||.|||.:..:||:|||||:|:|||||||||.|:|
Mouse   164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARA 228

  Fly   238 VANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 302
            |||:|.|.|:||:||||:|||:|:|.::|||||.:|......::|.|||||:|..|:|..:||:.
Mouse   229 VANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDN 293

  Fly   303 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIH 367
            |:|||||||:|||||||.||::||:|||||.:||||||:||||:||||||.|||.:.:..||.||
Mouse   294 EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIH 358

  Fly   368 TSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL--YRKK 430
            ...|::..|:....|.....:.:||:|:::|||||:.|:|.||...|.:||.::...|:  |.|.
Mouse   359 ARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKF 423

  Fly   431 EGTP 434
            ..||
Mouse   424 SATP 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 179/459 (39%)
Psmc2NP_035318.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 4/16 (25%)
PRK03992 44..430 CDD:179699 167/401 (42%)

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