DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and Psmc1

DIOPT Version :10

Sequence 1:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_032973.1 Gene:Psmc1 / 19179 MGIID:106054 Length:440 Species:Mus musculus


Alignment Length:440 Identity:402/440 - (91%)
Similarity:422/440 - (95%) Gaps:1/440 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGQNQS-AQGGAGEKKDDKDKKKKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKL 64
            |||:|| ..|..|.||||||||||||||:||||||||::.||||||.|||.|||||:||||||||
Mouse     1 MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKL 65

  Fly    65 ERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSE 129
            |||||||:||:|||||||::||.:||.||||||||||||||||||.|||||||||||||||||||
Mouse    66 ERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSE 130

  Fly   130 HYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQ 194
            ||||||||||||.||||||||||||||||:|||.|||||:|||||:|||||||||||||||.|||
Mouse   131 HYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQ 195

  Fly   195 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 259
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   196 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 260

  Fly   260 GDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDV 324
            |||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||
Mouse   261 GDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDV 325

  Fly   325 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDL 389
            ||||||||||||||||||||||||||||||||||||:|||.|||||||||:||.|.:||||||||
Mouse   326 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDL 390

  Fly   390 SGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKEGTPEGLYL 439
            ||||||||||||||||||||||||||||||||||:|||:|:|||||||||
Mouse   391 SGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 400/438 (91%)
Psmc1NP_032973.1 PTZ00361 1..440 CDD:185575 400/438 (91%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49 35/47 (74%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..104 14/19 (74%)

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