Protein Alignment Rpt2 and rpt-1

DIOPT Version :9

• Sequence 1: NP_001287493.1
• Gene: Rpt2 / 42828
• FlyBaseID: FBgn0015282
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_506005.1
• Gene: rpt-1 / 179641
• WormBaseID: WBGene00004501
• Length: 435
• Species: Caenorhabditis elegans
• Alignment Length: 457
• Identity: 179/457 - (39%)
• Similarity: 255/457 - (55%)
• Gaps: 70/457 - (15%)

  Fly    14 KKDD-KDKKKKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEF 77
            |||| |:::|.::......:...||..:||.|
 Worm    13 KKDDTKEEEKNFQALDEGDIAVLKRYGQGPYA--------------------------------- 44

  Fly    78 IRNQERLKPQDEKNEEERSKVDDLRGT--------------------------PMSVGNLEEII- 115
                |:||..|...|....||::|.|.                          |:.|....:||
 Worm    45 ----EQLKTLDADIENCLKKVNELSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIIT 105

  Fly   116 DDNH---AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEK 177
            .|.|   .:::....::..|.:...|....:|.|..|.::...:.:...|....||.||:|::|:
 Worm   106 SDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEE 170

  Fly   178 APQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 242
            .|..||:|:||...||::::|.||.||.|||.|..:||:|||||:|||||||||||.|:||||:|
 Worm   171 KPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRT 235

  Fly   243 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRT 307
            .|.|:||:||||:|||:|:|.::|||||.:|......::|.|||||||..|:|...||:.|:|||
 Worm   236 DACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRT 300

  Fly   308 MLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMT 372
            ||||:|||||||.||::||:|||||.:||||||:||||:|||:||.|||...:..|..||..:|:
 Worm   301 MLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMS 365

  Fly   373 LAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL--YRKKEGTPE 435
            :..|:....|.....:.:||:|:::|||||:.|:|.||...|.:||.::...|:  |.|...||.
 Worm   366 VERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVKGYAKFSATPR 430

  Fly   436 GL 437
            .|
 Worm   431 YL 432

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt2	NP_001287493.1	PTZ00361	1..439	CDD:185575	179/457 (39%)
rpt-1	NP_506005.1	RPT1	29..432	CDD:224143	172/439 (39%)
		AAA	214..345	CDD:278434	86/130 (66%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0554
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820