Protein Alignment Rpt2 and rpt-3

DIOPT Version :9

• Sequence 1: NP_001287493.1
• Gene: Rpt2 / 42828
• FlyBaseID: FBgn0015282
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_498429.1
• Gene: rpt-3 / 175925
• WormBaseID: WBGene00004503
• Length: 414
• Species: Caenorhabditis elegans
• Alignment Length: 409
• Identity: 201/409 - (49%)
• Similarity: 290/409 - (70%)
• Gaps: 28/409 - (6%)

  Fly    26 PPIP-TRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQER--LKPQ 87
            ||:| |.|....      |..:||      |....:|..|:.::||:.:|   .||.|:  |..|
 Worm    23 PPLPATCVDVSS------DDYIKL------TTLERQLAHLQVMEDYIKLE---TRNLEKELLHAQ 72

  Fly    88 DEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLN 152
            :|        |..::..|:.:|...|.:|.|||||.::.||.:||.:||.:|::.|:|||||.|:
 Worm    73 EE--------VKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALH 129

  Fly   153 HKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKP 217
            ...:|:|.||..:.|..:.:::.::.|..:|.||||||.|.||::|:|||||||.|.|:::||.|
 Worm   130 KYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDP 194

  Fly   218 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVF 282
            |:||::|||||.|||:||||||..|:|:|:||||||.:|||||:||::||::||:|:|::|||:|
 Worm   195 PRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIF 259

  Fly   283 IDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRID 347
            ||||||:.|||:|:.:|.:||:||.:||||||:||||...:|||||||||.:||||||:||||:|
 Worm   260 IDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLD 324

  Fly   348 RKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMK 412
            |||||||||.:.||.:|:...|||.|::||:|.:.:...|.:|||||.:||.|||:.|:||.|..
 Worm   325 RKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYV 389

  Fly   413 VTNEDFKKSKESVLYRKKE 431
            |..:|.:|:.::|:  ||:
 Worm   390 VLTKDLEKAYKNVV--KKD 406

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt2	NP_001287493.1	PTZ00361	1..439	CDD:185575	201/409 (49%)
rpt-3	NP_498429.1	PTZ00454	35..414	CDD:240423	196/391 (50%)
		AAA	198..331	CDD:278434	91/132 (69%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920