DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and AFG3L2

DIOPT Version :10

Sequence 1:NP_524469.2 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_006787.2 Gene:AFG3L2 / 10939 HGNCID:315 Length:797 Species:Homo sapiens


Alignment Length:270 Identity:110/270 - (40%)
Similarity:159/270 - (58%) Gaps:18/270 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 VLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYG 225
            ||.|:.|             ..:.|:.|.:....||.|.|.. |.:|:.|:::|.|.|||.||.|
Human   298 VLKDEID-------------VKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTG 348

  Fly   226 PPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVG 290
            ||||||||||||.|.:.:..|:.|.|||.::.::|.||..||:||.:|.::||.|:|||||||||
Human   349 PPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 413

  Fly   291 TKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 355
            .||...|.||:.|.:.|:.:||.::|||::..:|.::..|||.:.|||||:||||.||:|....|
Human   414 RKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPP 478

  Fly   356 DEKTKRRIFTIHTSRM----TLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 416
            |.|.:..||.:|...:    ||.:|....:|.......||||:..:|.||.|:|.|.....:..:
Human   479 DIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQK 543

  Fly   417 DFKKSKESVL 426
            .|:::.|.|:
Human   544 HFEQAIERVI 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_524469.2 PTZ00361 1..439 CDD:185575 110/270 (41%)
AFG3L2NP_006787.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..126
HflB 151..747 CDD:440233 110/270 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 759..797
Blue background indicates that the domain is not in the aligned region.

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