DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt2 and zgc:172295

DIOPT Version :9

Sequence 1:NP_001287493.1 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_009289955.1 Gene:zgc:172295 / 100136866 ZFINID:ZDB-GENE-080204-72 Length:570 Species:Danio rerio


Alignment Length:209 Identity:43/209 - (20%)
Similarity:72/209 - (34%) Gaps:64/209 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 ILYGP------PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG-----PKLVRE-----LF 270
            |:.||      .||..|..  .|.|..:|..|.....|:.|.:..:|     ||.:.:     :.
Zfish    12 IMLGPLVAAIDQGTSSTRF--LVFNAKTAELLSHHQVEIKQSFPKEGWVEEDPKEILQSVYECMD 74

  Fly   271 RVAEEHAPSIVFIDEIDAVG-------TKRYDSNSGG---------EREIQRTMLELLNQLDG-- 317
            |..|:.....:.:..|.|||       |..:|..:|.         :...|.|:..|:|:..|  
Zfish    75 RTCEKLTQLNIDVSNIKAVGVTNQRETTLVWDKQTGEPLYNAIVWLDLRTQSTVERLINKTPGKN 139

  Fly   318 ----FDSRG--------DVKVIMATNRIETLDPALIRP----GRIDRKIEFPLPDEK-------- 358
                .|..|        .||:....:.:|.:..|::..    |.:|..:.:.|...|        
Zfish   140 KNHLKDKTGLPISTYFSAVKLRWLMDNVEKVHEAVLSHRAMFGTVDSWLIWCLTGGKNGGVHCTD 204

  Fly   359 ----TKRRIFTIHT 368
                ::..:|.|||
Zfish   205 VTNASRTMLFNIHT 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt2NP_001287493.1 PTZ00361 1..439 CDD:185575 43/209 (21%)
zgc:172295XP_009289955.1 glycerol_kin 16..526 CDD:273549 41/205 (20%)
FGGY_GK1-3_metazoa 16..526 CDD:212664 41/205 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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