powered by:
Protein Alignment Rpt2 and shpk
DIOPT Version :9
Sequence 1: | NP_001287493.1 |
Gene: | Rpt2 / 42828 |
FlyBaseID: | FBgn0015282 |
Length: | 439 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_001341627.4 |
Gene: | shpk / 100001676 |
ZFINID: | ZDB-GENE-060526-357 |
Length: | 469 |
Species: | Danio rerio |
Alignment Length: | 143 |
Identity: | 32/143 - (22%) |
Similarity: | 42/143 - (29%) |
Gaps: | 31/143 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 156 HAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKG 220
|..||....|....| |:.|......:..:..|.:|....|..:.......|..
Zfish 247 HTAVGAALGDFQCSV------------YSCITDRGHAVLNMSTSAQLTFRMPAEFTPTSSPDPLS 299
Fly 221 VILYGPPGTGKTLLAKAVAN--QTSATFLRV----------------VGSELIQKYLGD-GPKLV 266
.|.|.|...|..|...|..| ...|||:|: :.|:||...|.. ...|.
Zfish 300 PIAYFPYFEGSYLAVAASLNGGNVMATFVRMLDSWMKEFGLEVSESSIYSQLIHSALAQPNTDLT 364
Fly 267 RELFRVAEEHAPS 279
.....:.|.||||
Zfish 365 VTSTLLGERHAPS 377
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG0554 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
Return to query results.
Submit another query.