DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13601 and AT1G28510

DIOPT Version :10

Sequence 1:NP_001262890.1 Gene:CG13601 / 42826 FlyBaseID:FBgn0039126 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_564311.1 Gene:AT1G28510 / 839751 AraportID:AT1G28510 Length:171 Species:Arabidopsis thaliana


Alignment Length:172 Identity:49/172 - (28%)
Similarity:83/172 - (48%) Gaps:27/172 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VFPAAKLGILAIKQVSKPIANVIKSNAKSSPFFRKYICMPPAQFYNWVE----VKTKMWALNMGG 65
            |.|..|||.||:|.:|||:|:.:|..||..|.||:.|       .|:.:    :.|:|.....|.
plant     2 VLPLMKLGTLAVKTISKPLASQLKHQAKVHPKFRQSI-------INFAQRNHRITTQMQRRIYGH 59

  Fly    66 R--VNVPPLNEAMAIELGANLLGEFIIFSIGAGLLIFEYSRQTIKENKKNELAQSEKMELTNMLT 128
            .  |.:.||:|..|::...:|:||..:|.:|..:::||..|.:..|.:|.|..:.|       |.
plant    60 ATDVEIRPLDEEKAVQAAVDLIGEIFLFGVGGAVVVFEVQRSSRSEARKEEARKQE-------LE 117

  Fly   129 EMNFRLERQDAQIREMTRVLADLDS-------RNIFRWHKEP 163
            |:..:.|..:.|:.::...|.:|:.       ..||:...:|
plant   118 ELRIKDEELEKQVADLKSKLEELEQLAKARGLSGIFQLKPQP 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13601NP_001262890.1 OPA3 9..130 CDD:462072 39/126 (31%)
AT1G28510NP_564311.1 OPA3 6..126 CDD:462072 41/133 (31%)
PilO <103..>159 CDD:442400 12/62 (19%)

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