DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13601 and CG43999

DIOPT Version :10

Sequence 1:NP_001262890.1 Gene:CG13601 / 42826 FlyBaseID:FBgn0039126 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_001036749.2 Gene:CG43999 / 42827 FlyBaseID:FBgn0264741 Length:166 Species:Drosophila melanogaster


Alignment Length:157 Identity:61/157 - (38%)
Similarity:100/157 - (63%) Gaps:3/157 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVIGVFPAAKLGILAIKQVSKPIANVIKSNAKSSPFFRKYICMPPAQFYNWVEVKTKMWALNMGG 65
            ||:||||.|||.:||||.:||||.|:||..||.:..|:..:..|||:.|:.::|::|||.|.:|.
  Fly     1 MVVGVFPLAKLALLAIKHISKPIGNLIKQTAKKNKSFKTLVVAPPARLYHVIDVRSKMWMLGLGQ 65

  Fly    66 RVNVPPLNEAMAIELGANLLGEFIIFSIGAGLLIFEYSRQTIKENKKNELAQSEKMELTNMLTEM 130
            ...:|||.:||.|::|.::|||.:||.|||.|::.|:.||...:..|:|..:..:.:|...:..:
  Fly    66 PRLIPPLTDAMTIQMGGDILGEMVIFIIGATLIVGEFKRQAKNDRLKHEKHKMHREKLEERIGNL 130

  Fly   131 NFRLERQDAQIREMTRVLADLDSRNIF 157
            ..::.|   |.:|:.::.:.|.||..:
  Fly   131 TNKVAR---QTKEINQLRSKLGSRETY 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13601NP_001262890.1 OPA3 9..130 CDD:462072 49/120 (41%)
CG43999NP_001036749.2 OPA3 9..130 CDD:462072 49/120 (41%)

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