DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ndc1 and Ndc1

DIOPT Version :10

Sequence 1:NP_651191.1 Gene:Ndc1 / 42825 FlyBaseID:FBgn0039125 Length:578 Species:Drosophila melanogaster
Sequence 2:XP_313856.6 Gene:Ndc1 / 1274699 VectorBaseID:AGAMI1_008184 Length:580 Species:Anopheles gambiae


Alignment Length:588 Identity:184/588 - (31%)
Similarity:314/588 - (53%) Gaps:35/588 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSSNACKLLLLGRCLRAVLLSVAIQFLLLTVFLLFVNFQLLHPLAWVTGTLRLVASWYTWFASIP 69
            |...|.:.:...|.:.::...:..|:||:|:||||:||.:|||:.|:.||:||:.|:|.|.||:|
Mosquito     6 SKDLAFRKICTERFVTSIYYCLLQQYLLVTIFLLFINFSILHPINWIVGTVRLLVSFYPWIASVP 70

  Fly    70 LVASVVLYGVILCQQHLSERR----YCPTRYRWLLHYGPRKVLFLFAHLLVGLLTAWLYTGYLHT 130
            |..:||::|::|.:..|.|.|    ||...||.|:    ::.:.|..:..:|.|||||||.:|..
Mosquito    71 LAIAVVVHGIVLAKSCLLETRYHSTYCQQLYRNLI----QRSILLLTNGTIGCLTAWLYTRFLRD 131

  Fly   131 DYQHLKYKCYGQDCISAYN--VYLLGIGMTAGCYYFVSVHMRKEISIEFPIVEQSRAEKMRELLY 193
            :|:.|.......|.:...:  |||:..|:..|||:|:......: :::|||:...:..:....|.
Mosquito   132 EYRLLFLPSVQDDTVFLNDRFVYLVMSGVFGGCYFFLREQQNPD-AVDFPIILLPKVAQYWNNLS 195

  Fly   194 ASLAKSLLSSLLPTISYTAVFCLFGPMVCHRLSHILS---VDMDERLDGFFGVVTNVRLLFYGYL 255
            :.|.||:..|::....|.:.:..|..:..|:|:.:|.   :..:..|..|..:|.::|||.|.:|
Mosquito   196 SVLTKSMRKSVIGMFIYFSFYYTFSCLFRHKLASVLGGARLQEESTLYSFCSIVMDIRLLVYTWL 260

  Fly   256 LTAQILSNMHLMRCFYGILLSEDLPLVVTKPRAAFAHEQDITLVAGLGVFNVYVVQCLAAHHFYK 320
            .:|.||||::||...:||.|:|  |.......:||....:..|...|....:.:||.||....:.
Mosquito   261 FSALILSNINLMHVLFGIFLAE--PQNFRIETSAFQANDEPLLADALAYKQIPIVQQLAVEDLFA 323

  Fly   321 LALRKNSPQRAEIFQLTEPGNRPASWRSLCDQCLSILGSFTEELTESMQKISILKCAQSLPMPKI 385
            :|..:...:|.::|.||.||..|.:||.|.|.|:.::|.||:||.:|:..|.:......:.|..:
Mosquito   324 IAEAQCLNRRKQLFSLTVPGGHPNNWRKLYDVCMKLIGDFTQELDQSIGGIELKPAPPMVLMGGV 388

  Fly   386 TESLTTSLMAEKVLLRQYNQKHGIRPIVSP-------SREVAVESPADGIRHFPNWCERVSTQLE 443
            ... |.|:..::.|.:||||..|||.:.:|       |.....|:.::|.|.          ...
Mosquito   389 LRP-TASMDKDRFLKKQYNQNFGIRSLSTPTLPGTPSSESNKQEAKSEGKRE----------SKA 442

  Fly   444 QSLQRLLQRVPGIVYLFNEPEGAKTTFLLA-NSLPVVYMTQALAQVCAASLKEDPYGVVQNDLPA 507
            .....:|:|:||..:||.|.:.||:.:||: .|..:|.:.|:|..:.:.||.||.|||:|||||.
Mosquito   443 MLFASMLKRIPGYDFLFTESKSAKSHYLLSVQSQLIVKVVQSLVAIASRSLYEDSYGVLQNDLPC 507

  Fly   508 IIKAINKLRNELDKLSSVIGNIRISSSSFNVLRCAVRRSLYAICLSFCDYLDDLLPPGEELRQLQ 572
            |:.|:.:|:..:||:.|:..:::....::..|:.||::|||....:|..|:..|:...|:::.||
Mosquito   508 IVHALLELKKVVDKIGSINLDVKKVDRNYIALKGAVKKSLYRFTTAFGPYIKHLVIEPEDIKALQ 572

  Fly   573 DLV 575
            ..|
Mosquito   573 GFV 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ndc1NP_651191.1 Ndc1_Nup 63..572 CDD:462824 158/525 (30%)
Ndc1XP_313856.6 None

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