DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sba and MBD5

DIOPT Version :9

Sequence 1:NP_001262888.1 Gene:sba / 42824 FlyBaseID:FBgn0016754 Length:1606 Species:Drosophila melanogaster
Sequence 2:XP_011509772.1 Gene:MBD5 / 55777 HGNCID:20444 Length:1740 Species:Homo sapiens


Alignment Length:1852 Identity:371/1852 - (20%)
Similarity:565/1852 - (30%) Gaps:740/1852 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 GWRRLTNNNEVAYISPSGKTLRTQFQIKDYLLTQGTCKCGLPCPLRPEYLFDFN----------- 304
            ||:|..:.|.|.|:||||..|....|:|.||||.|||||||.|||....:|:|:           
Human    24 GWQRRVDQNGVLYVSPSGSLLSCLEQVKTYLLTDGTCKCGLECPLILPKVFNFDPGAAVKQRTAE 88

  Fly   305 -----------------------------AQVPNQPLKLPTEASTATP-------TP-------- 325
                                         |..|:..|..|...:.|||       ||        
Human    89 DVKADEDVTKLCIHKRKIIAVATLHKSMEAPHPSLVLTSPGGGTNATPVVPSRAATPRSVRNKSH 153

  Fly   326 ----------CRHQRRFL--ESQQL------QLPQQQQQQQHLQHQQQQQQAVKDVSVDVAVSVS 372
                      |::..:.:  .|..:      :||..|||:.|..:.:|:          :..|..
Human   154 EGITNSVMPECKNPFKLMIGSSNAMGRLYVQELPGSQQQELHPVYPRQR----------LGSSEH 208

  Fly   373 GPAAVSDVFSTLMTSTARTATMVTPTAATSPAQAATTTTHEMANKDADCHKYGNNKLPATNRTAT 437
            |..:........:.|.|.:.:.:....:.||......:.......:...|...|:.....|||..
Human   209 GQKSPFRGSHGGLPSPASSGSQIYGDGSISPRTDPLGSPDVFTRSNPGFHGAPNSSPIHLNRTPL 273

  Fly   438 TPTPAPTPPPQHPNGMPTSQALALGG---VPVGVHPKRPTGGHVIKQPASVL------------- 486
                  :||....:|.|...:.|:.|   :|:.  |...|...|:|:|....             
Human   274 ------SPPSVMLHGSPVQSSCAMAGRTNIPLS--PTLTTKSPVMKKPMCNFSTNMEIPRAMFHH 330

  Fly   487 ----GPPCTPPLAVGGANTVIQQQQPLQQHPNFKDDPAGYLQQQTALLHNSLGVGLDATKTAAGT 547
                |||..||      .:...|::||..    :.||.|.|.                      .
Human   331 KPPQGPPPPPP------PSCALQKKPLTS----EKDPLGILD----------------------P 363

  Fly   548 STARALPQEPIV------HSSQQQQQQQQQ--------QLQQQQQLQRQK---------IRRLSL 589
            ..::.:.|.|::      ||:...|.....        .|.....|...|         ::|:..
Human   364 IPSKPVNQNPVIINPTSFHSNVHSQVPMMNVSMPPAVVPLPSNLPLPTVKPGHMNHGSHVQRVQH 428

  Fly   590 FGKWETDPAPATNSQPTNGTRALQVDAAAFARPQKPQVTCVTLVPPPQESPVSSSAAETLEKRPE 654
            .......|:|.|:.....||...:::|:                  ||.|..||::::.......
Human   429 SASTSLSPSPVTSPVHMMGTGIGRIEAS------------------PQRSRSSSTSSDHGNFMMP 475

  Fly   655 QVGAISTSH------ESPRQSLSSPTDSVDSAKS-------------------------TPSASP 688
            .||..:||.      .|||.::.||..|:.|:.|                         |||::.
Human   476 PVGPQATSSGIKVPPRSPRSTIGSPRPSMPSSPSTKSDGHHQYKDIPNPLIAGISNVLNTPSSAA 540

  Fly   689 KP-----QTQVPMQPQLLQM------RPHLQANLSAQTPVTVPAHVRVMRQQQAQIIPGQRLPVA 742
            .|     .:.|..||.||.|      ..|..|:..|.:.::..|..::..|.:   :.|.....:
Human   541 FPTASAGSSSVKSQPGLLGMPLNQILNQHNAASFPASSLLSAAAKAQLANQNK---LAGNNSSSS 602

  Fly   743 SSSAAMATMTRSIVTSTAGTSTI-------------TG-------------------------RP 769
            |:|.|:|..     .:|.|.||:             ||                         :|
Human   603 SNSGAVAGS-----GNTEGHSTLNTMFPPTANMLLPTGEGQSGRAALRDKLMSQQKDALRKRKQP 662

  Fly   770 VATTLN-------------------------NSNP--TVAQ-LQSM--------ANAMNGAGGGG 798
            ..|.|:                         .|.|  :::| ||||        :|:..|.|...
Human   663 PTTVLSLLRQSQMDSSAVPKPGPDLLRKQGQGSFPISSMSQLLQSMSCQSSHLSSNSTPGCGASN 727

  Fly   799 QLIMTSSGQL-LVIPTPSKQTTQ---------------------------HHRPGQPGQ------ 829
            ..:..|:.|| ...|:.:....|                           ||..|...|      
Human   728 TALPCSANQLHFTDPSMNSSVLQNIPLRGEAVHCHNANTNFVHSNSPVPNHHLAGLINQIQASGN 792

  Fly   830 -GVIIQQQQPA--ELHPQPGGGYIVSQPSPV---------------AAASSSSSS---------- 866
             |::.|.....  .|||.|....|.:..:||               |..|..|||          
Human   793 CGMLSQSGMALGNSLHPNPPQSRISTSSTPVIPNSIVSSYNQTSSEAGGSGPSSSIAIAGTNHPA 857

  Fly   867 ---STVILNSGGAKLLHHQIITSQAGQINQ---------------------ATSGGSGNQPQTV- 906
               :|.:|..|       .|:|:.||...|                     :.|..:.:.|..: 
Human   858 ITKTTSVLQDG-------VIVTTAAGNPLQSQLPIGSDFPFVGQEHALHFPSNSTSNNHLPHPLN 915

  Fly   907 --LLNTLP-----NGGYIVQQ------QPQT---------------------------------- 924
              ||::||     |..:::.|      ||..                                  
Human   916 PSLLSSLPISLPVNQQHLLNQNLLNILQPSAGEGKSEINLHPLGFLNPNVNAALAFLSSDMDGQV 980

  Fly   925 -------------QSPQQAEQILAMPQ--------------PPPAQTLIISSPD-------TKRR 955
                         |:..||..:|.:|.              |.|:.|.:.:.||       ...|
Human   981 LQPVHFQLLAALLQNQAQAAAMLPLPSFNLTISDLLQQQNTPLPSLTQMTAPPDHLPSNQSDNSR 1045

  Fly   956 ARKRKSSVCHTPPPS--GS---------PA-------KIISPQISPSIPNQAPA--LLHQQAAAA 1000
            |....:|....|.||  ||         ||       ..::||:...:.|.|.|  ..|.:.:.|
Human  1046 AETLLTSPLGNPLPSFAGSDTTFNPLFLPAVNGASGLMTLNPQLLGGVLNSASANTANHPEVSIA 1110

  Fly  1001 --------------AAAA----------------------------------------PQFQQQF 1011
                          |.||                                        ||.....
Human  1111 TSSQATTTTTTTSSAVAALTVSTLGGTAVVSMAETLLNISNNAGNTPGPAKLNSNSVVPQLLNPL 1175

  Fly  1012 QLSPGIQG--------------------IVVNKPNPPQQPQTQQLLLQNGQILQQVNLIGQQLL- 1055
             |..|:.|                    :..|:..||.|.|.|  |||..|.||...  ||..: 
Human  1176 -LGTGLLGDMSSINNTLSNHQLTHLQSLLNNNQMFPPNQQQQQ--LLQGYQNLQAFQ--GQSTIP 1235

  Fly  1056 MPAG------------LVMGPDATLL--QIQNMPATSLMTPQGPVMLRTP---SPQNKPSFISPS 1103
            .||.            :.|..||.||  :|...|..:.: |:.|.....|   :|......|.||
Human  1236 CPANNNPMACLFQNFQVRMQEDAALLNKRISTQPGLTAL-PENPNTTLPPFQDTPCELQPRIDPS 1299

  Fly  1104 AGGQ---QYLVGANGQLSPIGQIYSTPMGLVMPTGQQGGASFVQASPTTTTIQIQQQPAPQPTQI 1165
            .|.|   ..:||..|..| :..||..    |:....:|....:..:..:||   |..|.|..:.:
Human  1300 LGQQVKDGLVVGGPGDAS-VDAIYKA----VVDAASKGMQVVITTAVNSTT---QISPIPALSAM 1356

  Fly  1166 SL------QPAQATYMTETVMSRQGTAASPPDTTTCSPRSPERPSS-------HRSSGSD---MV 1214
            |.      .|...:.....|:..:.......|....:.|....|.:       :...|.:   ..
Human  1357 SAFTASIGDPLNLSSAVSAVIHGRNMGGVDHDGRLRNSRGARLPKNLDHGKNVNEGDGFEYFKSA 1421

  Fly  1215 QC-VSSSEPDAAVSPQSTESR-------QSPS---STDC-ERSICKNNVFTQP------------ 1255
            .| .|..:.|...||:...:|       ..|.   |:.| ||   .|||.|.|            
Human  1422 SCHTSKKQWDGEQSPRGERNRWKYEEFLDHPGHIHSSPCHER---PNNVSTLPFLPGEQHPILLP 1483

  Fly  1256 ---------------SGIYKHSEPKIR-RIHITSQTSAE-NGISLMQGQESPTTTQLLSSV---- 1299
                           ...||.:....: |:..|.:..|. ||   .:.::|....:|||:.    
Human  1484 PRNCPGDKILEENFRYNNYKRTMMSFKERLENTVERCAHING---NRPRQSRGFGELLSTAKQDL 1545

  Fly  1300 ------PTAQPTVEKTTVR----------TPTKRSRRPQRGAARAAPSASDKSFP---------- 1338
                  |::..::|.:.|:          ..:.....|....|::..|..|...|          
Human  1546 VLEEQSPSSSNSLENSLVKDYIHYNGDFNAKSVNGCVPSPSDAKSISSEDDLRNPDSPSSNELIH 1610

  Fly  1339 LPPRSFAIGELIWGPARGHPAWPGKIVKMPD--GVCTPSQQFDHVWVQWFGGGGRSTSELIPVNS 1401
            ..||:|.:|:|:||..:|..:||||:|:..|  ..|..|.:...|||.||   |..|...:....
Human  1611 YRPRTFNVGDLVWGQIKGLTSWPGKLVREDDVHNSCQQSPEEGKVWVMWF---GLHTFTQVEPEK 1672

  Fly  1402 LQSLSEGLEAHHKAQKDTRKSRKLNSQLERAIQEAMTELDNISASSTPAATSSSSATISAVPASA 1466
            |::|:|||||:.:.:|..|||.|||:.||.||.|||:|||.:            |.|:..:|   
Human  1673 LKTLTEGLEAYSRVRKRNRKSGKLNNHLEAAIHEAMSELDKM------------SGTVHQIP--- 1722

  Fly  1467 GPAVIGGQQQYQQQQQQQQQQQSPSSTNNKIN 1498
                           |..:|.:.|.....||:
Human  1723 ---------------QGDRQMRPPKPKRRKIS 1739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbaNP_001262888.1 MBD 241..315 CDD:128673 32/103 (31%)
PWWP 1344..1440 CDD:295359 42/97 (43%)
MBD5XP_011509772.1 MBD 21..79 CDD:294079 29/54 (54%)
Dnmt3b_related 1616..1706 CDD:99896 39/92 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165160474
Domainoid 1 1.000 66 1.000 Domainoid score I9965
eggNOG 1 0.900 - - E1_28KVR
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 178 1.000 Inparanoid score I4036
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm42277
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16112
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6504
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
77.010

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