DRSC/TRiP Functional Genomics Resources

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Protein Alignment sba and SPBC21C3.14c

DIOPT Version :9

Sequence 1:NP_001262888.1 Gene:sba / 42824 FlyBaseID:FBgn0016754 Length:1606 Species:Drosophila melanogaster
Sequence 2:NP_596594.1 Gene:SPBC21C3.14c / 2540519 PomBaseID:SPBC21C3.14c Length:841 Species:Schizosaccharomyces pombe


Alignment Length:331 Identity:69/331 - (20%)
Similarity:111/331 - (33%) Gaps:92/331 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1180 MSRQGTAASPPDTTTCSPRSPERPSSHRSSGSDMVQCVSSSEP--DAAVSPQ------------- 1229
            :||.|:.||     :...|.....:||:..   ||...|:..|  |..||.|             
pombe   499 LSRIGSVAS-----SAVQRLTAVKNSHKLK---MVDRSSAELPNFDYLVSDQVHKIVEINDEHAD 555

  Fly  1230 ------STES-----RQSPS-STDCERSICK-NNVFTQPSGIYK--HSEPKIRRIHITSQTSAEN 1279
                  ||.|     |..|: ..|.||.|.| :::..:...|:.  :|:..|:....||.:|:..
pombe   556 CDDVNFSTASFEIYERSIPTHGADSERKILKRDSLLNEDDEIFNDLNSDKTIKTNQATSTSSSNT 620

  Fly  1280 GISLMQGQESPTTTQLLSSVPTAQ-PTVEKTTVRT--PTKRSRRPQRGAARAAPSASDKSFPLPP 1341
            ......|..:....:.||:.|:.. |..|...|.:  |...|.....||....|....||.....
pombe   621 QEISYTGTLNDNINEGLSTFPSIDIPASEADNVYSILPIDVSTSEAEGAYSILPIDVPKSVAEET 685

  Fly  1342 RSFAIGELIWGPARGHPAWPGKIVKMPDGVCTPSQQFDHVWVQWFGGGGRSTSELIPVNSLQSLS 1406
            .||                      :|..|  |..:.:.|:            .::|::..||::
pombe   686 YSF----------------------LPSDV--PKSEAEKVY------------SILPIDVPQSVA 714

  Fly  1407 EGLEAHHKAQKDTRKSRKLNSQLERAIQEAMTELDNISASSTPAATSS---------------SS 1456
            |...:...:.....::.|:.|.|...:::...|.|.....|:...|.|               ||
pombe   715 EETYSFKPSDIPESEAEKIYSILPIDVKDPSLEKDGHVIDSSNLQTDSVKDYSEVSRADNLDASS 779

  Fly  1457 ATISAV 1462
            .||.:|
pombe   780 DTIFSV 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbaNP_001262888.1 MBD 241..315 CDD:128673
PWWP 1344..1440 CDD:295359 12/95 (13%)
SPBC21C3.14cNP_596594.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16112
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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