DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbrd-1 and YPL216W

DIOPT Version :9

Sequence 1:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_015108.1 Gene:YPL216W / 855885 SGDID:S000006137 Length:1102 Species:Saccharomyces cerevisiae


Alignment Length:511 Identity:105/511 - (20%)
Similarity:167/511 - (32%) Gaps:177/511 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 DLSTIRK----------RLHNKYYWQASEALEDFKLIFDNCLLYNLEGSP--------------- 125
            :.|.|||          |..|:::...:..|   |.|..|.|:...||.|               
Yeast    96 NFSPIRKVGHLVESAFQRFSNRFFIGDTVCL---KTIQKNALITYKEGEPNLVESPTIENNVTLF 157

  Fly   126 ----VYQAGKLLME----------AFYMRMESIDLST--------EVELK-PKSEKRK----RKA 163
                |:|:..::..          :.|:..|.::..:        :.|:| |:|...|    ...
Yeast   158 LVKDVFQSNGMMESEKGEISAPKLSLYLITECLNRESKGAALIVGQNEIKRPESHFSKFIIACFL 222

  Fly   164 TESLDQASTSFSAP-RASNNYSRQWLSSSSSWLCPPPM----PGGVSSFNPSFRNFVGPSLIPSF 223
            .|.|.:.|....|| |....|..::..:..   |.|.|    |   ...|.|......|..||  
Yeast   223 NEILIKVSNKEHAPWRVKQEYIERYDVNPK---CSPNMIDYLP---DRMNSSSSELYTPLTIP-- 279

  Fly   224 MPDSLVNPMQSMHPMSSMMNPIFKNNWETNEAMDPPPS------EPIS------YRPLDSLAAPL 276
             |:|.|.|..            :|...||:|..:...|      :.||      |..::|||...
Yeast   280 -PESDVEPAD------------WKETSETSETSETSLSKIKAIDDEISVSFDHIYDNVNSLAYND 331

  Fly   277 PSPPMEPMTLPWPTPA-PVESPASSPPPAPNPPIIICYKSLDRMIEKSHSDH-LLK--SMVKRKR 337
            ....::...||:..|: |.|:              |.|  ||..:|..:.|. ..|  |....:|
Yeast   332 LKGTVDDKELPFTGPSIPFEN--------------ISY--LDSSLEYKNIDQKWFKECSQFPTER 380

  Fly   338 KQVTWAFNQADYWRRYSQNPDYDHDREEKLDWKILQERLDSDNFESFDGFVSSVRKMFQNALRCF 402
            ..|.:.|  ..::.|:                      :...:| :||.|:::::.....||   
Yeast   381 LLVVYQF--LSFFGRF----------------------IGLSHF-NFDQFLTTIKCTSPEAL--- 417

  Fly   403 PEDGLVKVSVKKTNEIFEKRLPKYRELIATAKEKGR----QLVASREQDFRDSQNLLIKQE---- 459
             .|..||::..||          |....:...||.|    ..|.|.....|:..|:....|    
Yeast   418 -VDEYVKINFLKT----------YNSKGSFTNEKPRNEIYNQVTSSNVSQREKANVFNADESQRI 471

  Fly   460 --NANKNFKGWVPKPFIIKTESLFVQEQRVYKMEP--QDVQEFSPGTEPLDDQTYD 511
              |..:|.|   .:.||....:.||. ..::|.:|  .|..||         |:|:
Yeast   472 PSNFTRNQK---MRKFITDKSTEFVM-YSIFKGKPLKNDDMEF---------QSYE 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 17/95 (18%)
Bromodomain 328..423 CDD:413371 17/96 (18%)
YPL216WNP_015108.1 WAC_Acf1_DNA_bd 26..124 CDD:287503 6/27 (22%)
DDT 375..435 CDD:214726 16/98 (16%)
WHIM1 626..667 CDD:292246
WHIM2 750..793 CDD:292247
WHIM3 885..923 CDD:292248
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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