DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-1 and BDF1

DIOPT Version :9

Sequence 1:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_013503.1 Gene:BDF1 / 851115 SGDID:S000004391 Length:686 Species:Saccharomyces cerevisiae


Alignment Length:506 Identity:99/506 - (19%)
Similarity:180/506 - (35%) Gaps:141/506 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELQSNSNQPPPRNEPYLQPVNGIVQPPVIPPP-----NRP------GRRTNILEELKSVLNCLWR 56
            :|..||.|..|...|        .:|...|||     |.|      .::.:.|..:|:|.    |
Yeast   114 DLDENSKQELPMEVP--------KEPAPAPPPEPDMNNLPQNPIPKHQQKHALLAIKAVK----R 166

  Fly    57 NRFSYHFRHPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYWQASEALEDFKLIFDNCLLYNL 121
            .:.:..|..|||.|.|.:|.|...:|.|||||||.::|:...|....:..|||.|:.:|.:.:|.
Yeast   167 LKDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNG 231

  Fly   122 EGSPVYQAGKLLMEAFYMRMESIDLSTEVELKPKSEKRKRKATES-----LDQASTSFSAPRASN 181
            ..:.:.|..:.:..:|...|.::...   :..|...|.:|.:.:.     :.:|.|....|:.: 
Yeast   232 PNAGISQMARNIQASFEKHMLNMPAK---DAPPVIAKGRRSSAQEDAPIVIRRAQTHNGRPKRT- 292

  Fly   182 NYSRQWLSSSSSWLCPPPMPGGVSSFNPSFRNFVGPSLIPSFMPDSLVNPMQSMHPMSSMMNPIF 246
                         :.||....                          :.|.:|..|.|..:....
Yeast   293 -------------IHPPKSKD--------------------------IYPYESKKPKSKRLQQAM 318

  Fly   247 KNNWETNEAMDPPPSEPISY---RPLDSLAAPLPS------PPMEPMTL-----PWPTPAPVESP 297
            |......:.:........:|   .|:|.::..||:      .||:..|:     .|.        
Yeast   319 KFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQ-------- 375

  Fly   298 ASSPPPAPNPPIIICYKSLD------RMIEKS----HSDHLLKSMVKRKRKQVTWAFNQADYWRR 352
                           |::::      |::.|:    :.|..:.:|:..:.::|   ||..  |..
Yeast   376 ---------------YQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEV---FNSK--WAD 420

  Fly   353 YSQNPDYDHDREEKLDWKILQERLDSDNFESFDGFVSSVRKMFQNALRCFPEDGLVKVSVK---- 413
            .....|||.|.:.:...       |.|::||..........:..|....:.|:.|.::.|:    
Yeast   421 RPNLDDYDSDEDSRTQG-------DYDDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQL 478

  Fly   414 KTNEIFEKRLPKYRELIATAKEKGRQLVASREQDFRDSQNLLIKQENANKN 464
            |..|:  :::.|.|.|...:|::|:     |.:....|:|...|.....||
Yeast   479 KKQEL--EKIRKERRLARGSKKRGK-----RSKGRSGSKNASSKGRRDKKN 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 31/103 (30%)
Bromodomain 328..423 CDD:413371 19/98 (19%)
BDF1NP_013503.1 COG5076 1..373 CDD:227408 64/313 (20%)
Bromodomain <339..417 CDD:413371 16/103 (16%)
PTZ00108 <386..647 CDD:240271 33/156 (21%)
BET 527..589 CDD:407211
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345970
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 1 1.000 - - mtm9193
orthoMCL 1 0.900 - - OOG6_100249
Panther 1 1.100 - - O PTHR22880
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.700

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