DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-1 and AT1G17790

DIOPT Version :9

Sequence 1:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_564037.1 Gene:AT1G17790 / 838357 AraportID:AT1G17790 Length:487 Species:Arabidopsis thaliana


Alignment Length:431 Identity:93/431 - (21%)
Similarity:152/431 - (35%) Gaps:143/431 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RNEPYLQPVNGIVQPPV------IPPPNRPGRRT---------NILEELKSVLNCLWRNRFSYHF 63
            |.:|...|...:.:..|      :...|..|:::         .|.:...|:|..|.:::.::.|
plant    88 RFDPEANPGGSMAKSGVVGRSKKVKTGNGGGKKSGHGADKGTVQIFKNCNSLLTKLMKHKSAWVF 152

  Fly    64 RHPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYWQASEALEDFKLIFDNCLLYNLEGSPVYQ 128
            ..|||:..||:.|||.:||.||||.|::.:|....|....:..||.:|.|:|.:|||..|..||:
plant   153 NVPVDAKGLGLHDYHNIVKEPMDLGTVKTKLGKSLYKSPLDFAEDVRLTFNNAILYNPIGHDVYR 217

  Fly   129 AGKLLMEAFYMRMESIDLSTEVELKPKSEKRKRKATESLDQASTSFSAPRASNNYSRQWLSSSSS 193
            ..:||:..|.      |....:|::..:..||.|.|..::     |.||                
plant   218 FAELLLNMFE------DKWVSIEMQYDNLHRKFKPTRDIE-----FPAP---------------- 255

  Fly   194 WLCPPPMPGGVSSFNPSFRNFVGPSLIPSFMPDSLVNPMQSMHPMSSMMNPIFKNNWETNEAMDP 258
                                  .||:.|      :|.|:.::.|..|..:|             |
plant   256 ----------------------APSIAP------IVEPLPAIVPSPSPSSP-------------P 279

  Fly   259 PPSEPISYRPLDSLAAPLPSPPM--------EPMTLPWPTPAPVESPASS---PPPAPNPPIIIC 312
            ||..|           |:.:|.:        |.||:|....|.:.:|..:   ..|..|..:   
plant   280 PPPPP-----------PVAAPVLENRTWEREESMTIPVEPEAVITAPEKAEEEEAPVNNRDL--- 330

  Fly   313 YKSLDRMIEKSHSDHLLKSMVKRKRKQVTWAFNQADYWRRYSQNPDYDH-DREEKLDWKILQERL 376
                 .:.||......|:.:...|.:.|.....::        ||:... |.|.:||    .:.|
plant   331 -----TLEEKRRLSEELQDLPYDKLETVVQIIKKS--------NPELSQKDDEIELD----IDSL 378

  Fly   377 DSDNFESFDGFVSSVRKMFQNALRCFPEDGLVKVSVKKTNE 417
            |.:.......||:.                 .|.|:.|.||
plant   379 DINTLWELYRFVTG-----------------YKESLSKKNE 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 36/112 (32%)
Bromodomain 328..423 CDD:413371 18/91 (20%)
AT1G17790NP_564037.1 Bromodomain 133..230 CDD:413371 36/102 (35%)
BET 330..390 CDD:407211 13/79 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 1 1.000 - - mtm8402
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.770

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