DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-1 and AT5G55040

DIOPT Version :9

Sequence 1:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001119438.1 Gene:AT5G55040 / 835595 AraportID:AT5G55040 Length:916 Species:Arabidopsis thaliana


Alignment Length:708 Identity:142/708 - (20%)
Similarity:218/708 - (30%) Gaps:308/708 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 TNILEE--LKSVLNCLWRNRFSYHFRHPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYWQAS 103
            |.||::  |:.:|:.|.:......:..|||...|  ||||.:::||||.||:||:|.|..|....
plant   183 TPILDKKSLELILDKLQKKDIYGVYAEPVDPEEL--PDYHDMIEHPMDFSTVRKKLANGSYSTLE 245

  Fly   104 EALEDFKLIFDNCLLYNLEGSPVYQAGKLLMEAFYMRMESI---------DLSTEVELKPKSEKR 159
            |...|..||..|.:.||...:..|:..:.:.|....:.|..         :|.|:.::||.|..:
plant   246 ELESDVLLICSNAMQYNSSDTVYYKQARTIQEMGKRKFEKARLKIKRAEKELKTDEKVKPDSSVK 310

  Fly   160 KRK----ATESLDQASTSFSAPRASNNYSRQWLSSSSSWLCPPPMPGGVSSFNP----------- 209
            |:.    :...|:...:.||:  .:|      |:|           ||.|...|           
plant   311 KQVRQPFSRNGLEAVGSDFSS--GAN------LAS-----------GGASQNEPVSTQIGGHEKH 356

  Fly   210 SFRN--FVGPSLIPSFMPDSLVNPMQSMHPMSS----------MMNPIFKNNWETNEAMDP--PP 260
            |:.:  |.|.:        |||:.::....:||          .::.:.::...|.|..|.  ..
plant   357 SYTDVLFEGNT--------SLVDSLEKAEDLSSGKGLFGKCGRKLSVVEEDRRATYEDSDQQGDR 413

  Fly   261 SEPI--------------------SY-RPLDSLAA------------------------------ 274
            ||.|                    :| |.|...||                              
plant   414 SESIFTTFESEIKQFVAVGLHAEHAYGRSLARFAATLGPVAWKIASQRIEQALPADFKFGRGWVG 478

  Fly   275 ---PLPSP--------PMEP-------------------MTLPWPTPAPVESPASSPP------- 302
               |||:|        |.||                   .|| :.||.|.:....|.|       
plant   479 EYEPLPTPVLLFETCTPKEPPKKASVFSKRKSNAATKTNETL-FKTPLPAKEQQGSRPVRDGNHA 542

  Fly   303 -PAPNPPIIICYKSLDRMIEKSHSDHL-----LKSMVKRKRKQVTWAFNQADYWRRYSQNPDYDH 361
             |.|        .|:..:.|.|.|...     ||||            :|.:|     :||    
plant   543 FPFP--------ASIGALSEGSPSFVATQVGNLKSM------------SQHEY-----RNP---- 578

  Fly   362 DREEKLDWKILQERL-----------------------------DSDNFESFDGFVSSVRKM--- 394
               .:||:...|.|:                             .||...|:......:|.|   
plant   579 ---SQLDFVKPQNRIPQQVELNLPPPAEQTNSGSGCVLENQSFGKSDTVASYRSSSDMMRNMSST 640

  Fly   395 --------------FQNALRCFPEDGLVKVSVKKTNEIFEKRLPKYRELIATA---KEKGRQLVA 442
                          |...||    :|  |||....|.:|:.......::..||   ::..||...
plant   641 DSEHYKHQMTTNGIFPGGLR----NG--KVSPGVNNRMFDLSTDFANQMSRTATSSQQPMRQQSQ 699

  Fly   443 SREQDFRDSQNLLIK---QENANKNF----------------------------KGWV------- 469
            |.|:..:..:|...:   |.|:..|.                            :.|:       
plant   700 SHEEQAQIMRNFNERARTQHNSTYNHPKADAPPKISSPQSARSEDSGNASVAAARAWMSIGAGGN 764

  Fly   470 ----------PKPFIIKTESLFVQ-----EQRVYKMEPQDVQE--FSPGTEPLDDQTY 510
                      ||...|..|||:..     .|:.:|  |:|.:|  |.|.......||:
plant   765 NKQTFENASNPKSSQISAESLYNPSREHFHQQAFK--PRDAEETQFHPQRNGFPFQTF 820

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 34/103 (33%)
Bromodomain 328..423 CDD:413371 26/145 (18%)
AT5G55040NP_001119438.1 Bromodomain 187..283 CDD:99922 31/97 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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