DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbrd-1 and BET9

DIOPT Version :9

Sequence 1:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001190308.1 Gene:BET9 / 831277 AraportID:AT5G14270 Length:689 Species:Arabidopsis thaliana


Alignment Length:628 Identity:125/628 - (19%)
Similarity:218/628 - (34%) Gaps:224/628 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 PGRRTN-----------------ILEELKSVLNCLWRNRFSYHFRHPVDSVSLGVPDYHAVVKHP 84
            ||:..|                 ::::.:::|..|..:::.:.|..|||.|.|.:.||..|::||
plant   114 PGKTVNPISAASKPTPVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHP 178

  Fly    85 MDLSTIRKRLHNKYYWQASEALEDFKLIFDNCLLYNLEGSPVYQAGKLLMEAFYMRMESID--LS 147
            |||.|::.:|.:..|...||...|.:|.|.|.:.||..|:.||.....|.:.|.:|.::::  ||
plant   179 MDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLS 243

  Fly   148 -TEVELKPKS-----EKR--------KRKATESLDQASTSFSAPRASNNYSRQWLSSSSSWLCPP 198
             |:|..:|.:     ||.        |::.|.::|..:....|.|...:..|..|......|...
plant   244 GTKVHTEPSNLDAHKEKHIVIPVPMAKKRKTTAVDCENVVDPAKRVMTDEDRLKLGKDLESLTEF 308

  Fly   199 PM------------PGGV-----------------------------------SSFNPSFRNFVG 216
            |.            .||:                                   ||..|.....:.
plant   309 PAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLREIQNKKSSVEPCEIELLH 373

  Fly   217 PSLIP----------SFMPDSLVNPMQSMHPMSSMMNPI----------FKNNWETNEAMDPPPS 261
            .| :|          |.:.|.:|:..::.||.|| ::|:          ...|...:.:.||..|
plant   374 GS-VPGNSSMQHCDGSELDDEVVDIGENEHPTSS-ISPVTIEKDLVLGNSNGNSLGSVSGDPKMS 436

  Fly   262 EPISYRPLDSLAAPLPSPPMEPMTLPWPTPAPVESPAS----------SPP-------------- 302
            .      |...:..|.:..:|||.....:.:|....||          ||.              
plant   437 S------LPRASKGLGTIDLEPMLDGATSASPTRGLASVGGLDQLESASPEKISSVEADCQQDGN 495

  Fly   303 PAPN----PPIIICYKSLDRMIEKSHSDHLLKS-----MVKRKRKQVTWAFNQADYWRRYSQNPD 358
            .|.|    ||            |||:...:||:     ::|.:.|.:    ||.|     :::|:
plant   496 SAQNEKQLPP------------EKSYRAAILKNRFADIILKAREKPL----NQND-----TRDPE 539

  Fly   359 -YDHDREE-KLDWKILQERLDSDNFESFDGFVSSVRKMFQNALRCFPEDGLVKVSVKKTNEIFEK 421
             ...:||| :|..|..:.||.::            .|..:.|.|            |...:...:
plant   540 KLQREREELELQKKKEKARLQAE------------AKAAEEARR------------KAEAQAAAE 580

  Fly   422 RLPKYRELIATAKEKGRQLVASREQD--------FRDSQNLL-----------IKQENA------ 461
            ...:.:..:...:|..||.:...||.        |.:...||           |::|:.      
plant   581 AAAEAKRKLELEREAARQALMEMEQSVELNENAKFLEDLELLKTVDTDHLTNTIEEEDGPDVGLR 645

  Fly   462 NKNFKGWVPKPFIIKTESLFVQEQRVYKMEPQDVQEFSPGTEP 504
            :.:|.|..|           :::..::..:.:|.:|..|.|.|
plant   646 SFSFGGSNP-----------LEQLGLFMKQDEDEEEADPLTSP 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 34/120 (28%)
Bromodomain 328..423 CDD:413371 19/101 (19%)
BET9NP_001190308.1 Bromo_plant1 137..235 CDD:99938 32/97 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8402
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.770

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