DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-1 and GTE2

DIOPT Version :10

Sequence 1:NP_651190.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_196617.2 Gene:GTE2 / 830920 AraportID:AT5G10550 Length:581 Species:Arabidopsis thaliana


Alignment Length:438 Identity:106/438 - (24%)
Similarity:158/438 - (36%) Gaps:137/438 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LKSVL-NC------LWRNRFSYHFRHPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYWQASE 104
            |||:: .|      |.::::|:.|.:|||.|.||:.|||.:|..||||.|::..|....|....:
plant   171 LKSMMTTCGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSPID 235

  Fly   105 ALEDFKLIFDNCLLYNLEGSPVYQAGKLLMEAFYMRMESIDLSTEVELKPKSEKRKRKATESLDQ 169
            ...|.:|.|.|.:.||.:|..||...:.|:..|                                
plant   236 FASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQF-------------------------------- 268

  Fly   170 ASTSFSAPRASNNYSRQWLSSSSSWLCPPPMPGGVSSFNPSFRNFVGPSLIPSFMPDSLVNPMQS 234
                                  ..|            |||:.:.|                ..|.
plant   269 ----------------------DVW------------FNPTLKRF----------------EAQE 283

  Fly   235 MHPMSSMMNPIFKNN---WETNEAMDPPPSEP--ISY-RPLDS---LAAPLPSPPMEPMTL-PWP 289
            :..|.|...|..::|   |..|...:.....|  ||. :.|||   |...||.||:..:|. |.|
plant   284 VKVMGSSSRPGPEDNQRVWNQNNVAENARKGPEQISIAKKLDSVKPLLPTLPPPPVIEITRDPSP 348

  Fly   290 TPAPVESPASSPPPAPNP-PIIICYKSLD-RMIEKSHSDHLLKSMVKRKRKQVTWAFNQADYWRR 352
            .|:||:.|   |||:|.| |:.....||: |...|.....|.|...|...|:......:......
plant   349 PPSPVQPP---PPPSPPPQPVNQVEASLEVRETNKGRKGKLPKPKAKDPNKREMTMDEKGKLGVN 410

  Fly   353 YSQNP----------------DYDHDREE-KLDWKILQERLDSDNFESFDGFVSSVRKMFQNALR 400
            ..:.|                |...|.:| :||    .|.||::.....|.||::.|||.....|
plant   411 LQELPPEKLGQLIQILRKRTRDLPQDGDEIELD----IEALDNETLWELDRFVTNYRKMASKIKR 471

  Fly   401 CFPEDGLVK-VSVKKTNEIFEKRLPKYRELIATAKEKGRQLVASREQD 447
                .|.:: ||....|      :|...|: .:|:::||:...:.|:|
plant   472 ----QGFIQNVSTPPRN------MPPVTEM-GSAEKRGRKGGEAGEED 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_651190.1 Bromodomain 39..143 CDD:445827 35/102 (34%)
Mucin15 139..>291 CDD:406167 26/161 (16%)
Bromodomain 328..423 CDD:445827 24/112 (21%)
GTE2NP_196617.2 Bromo_plant1 174..272 CDD:99938 33/163 (20%)
BET 398..461 CDD:435704 12/66 (18%)

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