DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-1 and GTE2

DIOPT Version :9

Sequence 1:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_196617.2 Gene:GTE2 / 830920 AraportID:AT5G10550 Length:581 Species:Arabidopsis thaliana


Alignment Length:438 Identity:106/438 - (24%)
Similarity:158/438 - (36%) Gaps:137/438 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LKSVL-NC------LWRNRFSYHFRHPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYWQASE 104
            |||:: .|      |.::::|:.|.:|||.|.||:.|||.:|..||||.|::..|....|....:
plant   171 LKSMMTTCGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSPID 235

  Fly   105 ALEDFKLIFDNCLLYNLEGSPVYQAGKLLMEAFYMRMESIDLSTEVELKPKSEKRKRKATESLDQ 169
            ...|.:|.|.|.:.||.:|..||...:.|:..|                                
plant   236 FASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQF-------------------------------- 268

  Fly   170 ASTSFSAPRASNNYSRQWLSSSSSWLCPPPMPGGVSSFNPSFRNFVGPSLIPSFMPDSLVNPMQS 234
                                  ..|            |||:.:.|                ..|.
plant   269 ----------------------DVW------------FNPTLKRF----------------EAQE 283

  Fly   235 MHPMSSMMNPIFKNN---WETNEAMDPPPSEP--ISY-RPLDS---LAAPLPSPPMEPMTL-PWP 289
            :..|.|...|..::|   |..|...:.....|  ||. :.|||   |...||.||:..:|. |.|
plant   284 VKVMGSSSRPGPEDNQRVWNQNNVAENARKGPEQISIAKKLDSVKPLLPTLPPPPVIEITRDPSP 348

  Fly   290 TPAPVESPASSPPPAPNP-PIIICYKSLD-RMIEKSHSDHLLKSMVKRKRKQVTWAFNQADYWRR 352
            .|:||:.|   |||:|.| |:.....||: |...|.....|.|...|...|:......:......
plant   349 PPSPVQPP---PPPSPPPQPVNQVEASLEVRETNKGRKGKLPKPKAKDPNKREMTMDEKGKLGVN 410

  Fly   353 YSQNP----------------DYDHDREE-KLDWKILQERLDSDNFESFDGFVSSVRKMFQNALR 400
            ..:.|                |...|.:| :||    .|.||::.....|.||::.|||.....|
plant   411 LQELPPEKLGQLIQILRKRTRDLPQDGDEIELD----IEALDNETLWELDRFVTNYRKMASKIKR 471

  Fly   401 CFPEDGLVK-VSVKKTNEIFEKRLPKYRELIATAKEKGRQLVASREQD 447
                .|.:: ||....|      :|...|: .:|:::||:...:.|:|
plant   472 ----QGFIQNVSTPPRN------MPPVTEM-GSAEKRGRKGGEAGEED 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 35/102 (34%)
Bromodomain 328..423 CDD:413371 24/112 (21%)
GTE2NP_196617.2 Bromo_plant1 174..272 CDD:99938 33/163 (20%)
BET 398..461 CDD:407211 12/66 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8402
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.770

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