DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbrd-1 and GTE8

DIOPT Version :10

Sequence 1:NP_651190.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001327403.1 Gene:GTE8 / 822345 AraportID:AT3G27260 Length:822 Species:Arabidopsis thaliana


Alignment Length:571 Identity:122/571 - (21%)
Similarity:198/571 - (34%) Gaps:173/571 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 ILEELKSVLNCLWRNRFSYHFRHPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYWQASEALE 107
            ::::..::|..||.:..|:.|:.|||.|.|.:|||...:||||||.|::|.|.:..|....|...
plant   176 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEFAA 240

  Fly   108 DFKLIFDNCLLYNLEGSPVYQAGKLLMEAFYMRMESIDLSTEVELKPKSEKRKRKAT-ESLDQAS 171
            |.:|.|.|.:.||..|..|:..|.:|.:.|..|.::|    :.:|.|.|.:.....| |..|:..
plant   241 DVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTI----KKKLPPCSMQTLPAVTLEPNDERK 301

  Fly   172 TSFSAPRASNNYSRQWLSSSSSWLCPPPMPGGVSSFNPSFRNFVGPSL------IPSFMPDSL-- 228
            .:.|.|.|    .::.::|......|.|:...::...   |:.:|..|      :|:.:.|.|  
plant   302 AAISVPPA----KKRKMASPVRESVPEPVKPLMTEVE---RHRLGRQLESLLDELPAHIIDFLKK 359

  Fly   229 ---------------------------------------------VNP-----MQSMHPMSSMMN 243
                                                         |.|     :....|.:|.:.
plant   360 HNSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQNKEAKQTNVEPCEIELINGSRPSNSSLQ 424

  Fly   244 PIFKNNWETNEAMD---PPPSEPISYRPLDSLAAPLPSPPMEPMTLPWPTPAPVESPASSPPPAP 305
               :.|...:|.:|   ||.|.  |....||.::...|...:||         |:..:|..|...
plant   425 ---RGNEMADEYVDGNEPPISR--SSSDSDSGSSEDQSDDAKPM---------VQGDSSKMPETA 475

  Fly   306 NPPIIICYKSLDRMIEKSHSDHLLKSMVKRKR---KQVTWAFNQADYWRRY---SQNPDYDHD-- 362
            |        |..:..|.:..|.|....:....   .:.|.|..|.|...:.   |...|..|:  
plant   476 N--------SEAQRDENTRIDDLFVGSLCITGVFITESTGALEQMDICSQQKLSSDESDGQHEGN 532

  Fly   363 -------REEKLDWKILQERLDSDNFESFDGFVSSVRK--MFQNALRCFPEDGLVKVSVKKTNE- 417
                   .|::....:|:.|        |...:...|:  :.||.::..||      .::|..| 
plant   533 ILETPASSEKRYRAALLKNR--------FADIILKAREKPLPQNGIKGDPE------RLRKEREE 583

  Fly   418 -IFEKRLPKYR---------------------ELIATAKEKGRQLVASREQDFRDSQNLLIKQE- 459
             :.:|:..|.|                     |..|.||.|       ||.:...::..|:|.| 
plant   584 LVLQKKKEKARLQAEAEAAEDARRQAEAEAAAEAAAEAKRK-------RELEREAARQALLKMEK 641

  Fly   460 ----NANKNFKGWVPKPFIIKTESLFVQEQRVYKMEPQDVQEFSPGTEPLD 506
                |.|..|           .|.|.:......:..|...:|.|| ..|||
plant   642 TVEINENSRF-----------LEDLEMLSSSAPEQLPSSAEETSP-ERPLD 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_651190.1 Bromodomain 39..143 CDD:445827 36/99 (36%)
Mucin15 139..>291 CDD:406167 36/213 (17%)
Bromodomain 328..423 CDD:445827 20/113 (18%)
GTE8NP_001327403.1 Bromo_plant1 176..274 CDD:99938 35/97 (36%)
BET 330..393 CDD:435704 6/65 (9%)

Return to query results.
Submit another query.