DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-1 and cecr2

DIOPT Version :9

Sequence 1:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_005174419.1 Gene:cecr2 / 799918 ZFINID:ZDB-GENE-131121-533 Length:1502 Species:Danio rerio


Alignment Length:354 Identity:91/354 - (25%)
Similarity:122/354 - (34%) Gaps:99/354 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IPP---------PNRPGRRTNILEE-------LKSVLNCLWRNRFSYHFRHPVDSVSLGVPDYHA 79
            :||         |.|..|||....|       |..||..|..::.::.|..|||...  .|:||.
Zfish   376 LPPELLNLETHSPIRRARRTKQFYEIDDDYTALYKVLEALKAHKDAWPFMEPVDESY--APNYHE 438

  Fly    80 VVKHPMDLSTIRKRLHNKYYWQASEALEDFKLIFDNCLLYNLEGSPVYQAGKLLMEAF----YMR 140
            :::.|||||||.::|::..|....|.:.|.||:|.|||.||.|.|......:.|...|    ...
Zfish   439 IIQTPMDLSTIERKLNDGEYLAKDEFVADVKLMFGNCLEYNGEESEYTIMAESLERCFTRALLKH 503

  Fly   141 MESIDLSTEVELKPKSEKRKRK----------------ATESLDQASTSFSAPRASNNYSRQWLS 189
            ..|.|..|:.|....||.||.|                |||.:.:..||.|.  ..||..::   
Zfish   504 FPSEDGDTDEEFHVSSEDRKDKKKNKNHKQSGPESLIRATEQVQKRKTSNSG--KGNNQQQE--- 563

  Fly   190 SSSSWLCPPPMPGGVSSFNPSFRNFVGPSLIPSFMPDSLVNPMQSMHPMSSMMNPIFKNNWETNE 254
            ...|.|.|||         |.:.|  ||....:..|......|  :||......|.....:..:.
Zfish   564 KPKSTLQPPP---------PHYSN--GPPHPHNIHPGQQQRGM--LHPAQQFQRPSGPGMYAQHM 615

  Fly   255 AMDP----PPSEPISYRP-----------------------------LDSLAAPLPSPPMEPMTL 286
            .:|.    |...|:..||                             :.....|| .||.:..:.
Zfish   616 MIDAQYPYPGQRPLISRPPGDHENQHVPHFNMQGSHINGPHLGTRYTVGPDGQPL-QPPHQQHSY 679

  Fly   287 PWPTPAPVESP---------ASSPPPAPN 306
            ..||..|...|         ..||||..|
Zfish   680 SGPTHGPSLGPRPMALQPGGLCSPPPEGN 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 38/114 (33%)
Bromodomain 328..423 CDD:413371
cecr2XP_005174419.1 DDT 23..63 CDD:280886
ARGLU 202..366 CDD:291991
Bromo_gcn5_like 403..503 CDD:99941 34/101 (34%)
Med15 675..>1110 CDD:255446 9/34 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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