DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-1 and BRDT

DIOPT Version :9

Sequence 1:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001229735.2 Gene:BRDT / 676 HGNCID:1105 Length:951 Species:Homo sapiens


Alignment Length:434 Identity:112/434 - (25%)
Similarity:178/434 - (41%) Gaps:98/434 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IVQPPVIPP----PNRPGRRTNILEEL-KSVLNCLWRNRFSYHFRHPVDSVSLGVPDYHAVVKHP 84
            ||.||  ||    ..:.||.||.|:.| |.||..||::.||:.|:.|||:|.|.:|||:.::|:|
Human    11 IVNPP--PPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNP 73

  Fly    85 MDLSTIRKRLHNKYYWQASEALEDFKLIFDNCLLYNLEGSPVYQAGKLLMEAFYMRMESIDLSTE 149
            |||:||:|||.||||.:|||.:|||..:|.||.|||..|..:....:.|.:.|..::..:....:
Human    74 MDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQ 138

  Fly   150 -VELKPKSEKRKRKATESLDQASTS--FSAPRASNNYSRQWLSSSSSWLCPPPMPGGVSSFNPSF 211
             |.:|.:.:|.|...|:.....|::  .|:|.|:....:|                         
Human   139 VVGVKERIKKGKAGGTQQNIAVSSAKEKSSPSATEKVFKQ------------------------- 178

  Fly   212 RNFVGPSLIPSFMPDSLVNPMQ-----SMHPMSSMMNPIFKNNWETNEAMDPPPSEPISYRPLDS 271
                  ..|||..|.:.::|:.     |::..|.....:.|......:...|..|          
Human   179 ------QEIPSVFPKTSISPLNVVQGASVNSSSQTAAQVTKGVKRKADTTTPATS---------- 227

  Fly   272 LAAPLPSPPMEPMTLPWPTPAPVESPASSPPPAPNPP------------IIICYKSLDRMIEKSH 324
              |...|...        :|...|...:.||...|.|            ::...|..:::   .|
Human   228 --AVKASSEF--------SPTFTEKSVALPPIKENMPKNVLPDSQQQYNVVKTVKVTEQL---RH 279

  Fly   325 SDHLLKSMVKRKRKQVTWAF-NQADY-------WRRYSQNPDYDHDREEKLDWKILQERLDSDNF 381
            ...:||.|:.:|.....|.| |..|.       :....:||         :|...::|::|:..:
Human   280 CSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNP---------MDLGTIKEKMDNQEY 335

  Fly   382 ESFDGFVSSVRKMFQNALRCFPEDGLVKVSVKKTNEIFEKRLPK 425
            :....|.:.||.||.|..:..|.|..|....:...::||....|
Human   336 KDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSK 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 50/104 (48%)
Bromodomain 328..423 CDD:413371 24/102 (24%)
BRDTNP_001229735.2 Bromo_Brdt_I_like 27..133 CDD:99929 50/105 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..232 4/37 (11%)
Nuclear localization signal. /evidence=ECO:0000269|PubMed:22971749 213..224 1/10 (10%)
Bromo_Brdt_II_like 276..377 CDD:99930 25/112 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 399..424
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 448..515
BET 513..575 CDD:293640
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 614..702
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 886..928
BRD4_CDT 909..951 CDD:293710
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I4344
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100249
Panther 1 1.100 - - O PTHR22880
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
76.820

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