DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-1 and Brd4

DIOPT Version :10

Sequence 1:NP_651190.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001273559.1 Gene:Brd4 / 57261 MGIID:1888520 Length:1401 Species:Mus musculus


Alignment Length:660 Identity:155/660 - (23%)
Similarity:226/660 - (34%) Gaps:228/660 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNELQSNSNQPPPRNEPYLQPVNGIVQPPVIPPPNRPGRRTNILEE-LKSVLNCLWRNRFSYHFR 64
            |:..|:.: ||.|.|.....|     .||....||:|.|:||.|:. |:.||..||:::|::.|:
Mouse    26 MSTTQAQA-QPQPANAASTNP-----PPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQ 84

  Fly    65 HPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYWQASEALEDFKLIFDNCLLYNLEGSPVYQA 129
            .|||:|.|.:|||:.::|.|||:.||:|||.|.|||.|.|.::||..:|.||.:||..|..:...
Mouse    85 QPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLM 149

  Fly   130 GKLLMEAFYMRMESIDLSTE------VELKPKSEKRKRKATESLDQASTSFSAPRASNNYSRQWL 188
            .:.|.:.|..::.  :|.||      |:.|.:...||.....:....||..:..:||.:...|..
Mouse   150 AEALEKLFLQKIN--ELPTEETEIMIVQAKGRGRGRKETGRAAKPGVSTVPNTTQASTSPQTQTP 212

  Fly   189 SSSSSWLCPPPMPGGVSSFNPSFRNFVGPSLIPSFMPDSLVNPMQSMHPMSSMMNPIFKNNWETN 253
            ..:.    |||:......|             |:..||.:..|     |:.:|:           
Mouse   213 QQNP----PPPVQATTHPF-------------PAVTPDLIAQP-----PVMTMV----------- 244

  Fly   254 EAMDPPPSEPISYRPLDSLAAPLPSPPMEPMTLPWPTPAPVESPASSPPP--APNPPIIICYKSL 316
                  |.:|        |..|.|.||..|     |.||||..|..|.||  |..|..:...|.:
Mouse   245 ------PPQP--------LQTPSPVPPQPP-----PPPAPVPQPVQSHPPIIATTPQPVKTKKGV 290

  Fly   317 DRMI----------------------------------------------------EKSH--SDH 327
            .|..                                                    |||.  |:.
Mouse   291 KRKADTTTPTTIDPIHEPPSLAPEPKTAKLGPRRESSRPVKPPKKDVPDSQQHPGPEKSSKISEQ 355

  Fly   328 L------LKSMVKRKRKQVTWAFNQADYWRRYSQNP---------DYDHDREEKLDWKILQERLD 377
            |      ||.|..:|.....|.|          ..|         ||....:..:|...::.:|:
Mouse   356 LKCCSGILKEMFAKKHAAYAWPF----------YKPVDVEALGLHDYCDIIKHPMDMSTIKSKLE 410

  Fly   378 SDNFESFDGFVSSVRKMFQNALRCFPEDGLVKVSVKKTNEIFEKRLPK----------------- 425
            |..:.....|.:.||.||.|..:..|.|..|....:|..::||.|..|                 
Mouse   411 SREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVTVSSPAV 475

  Fly   426 -------------------------------------YRELIATAKEKGRQLVA----------S 443
                                                 ..||....|....||.|          .
Mouse   476 PPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKK 540

  Fly   444 REQDFRDSQNLLIK-----QENANKNFKGWVPKPFIIKTESLFVQEQRVYKMEPQDVQEFSPGTE 503
            :|:|.::.:....|     :||.....|...||    ||:........|.|.||...:     |:
Mouse   541 KEKDKKEKKKEKHKKKEEVEENKKSKTKELPPK----KTKKNNSSNSNVSKKEPVPTK-----TK 596

  Fly   504 PLDDQTYDSD 513
            |  ..||:|:
Mouse   597 P--PPTYESE 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_651190.1 Bromodomain 39..143 CDD:445827 44/104 (42%)
Mucin15 139..>291 CDD:406167 31/157 (20%)
Bromodomain 328..423 CDD:445827 25/109 (23%)
Brd4NP_001273559.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58 12/37 (32%)
Bromo_Brdt_I_like 58..164 CDD:99929 44/107 (41%)
Bromo_Brdt_II_like 355..456 CDD:99930 25/110 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 462..617 25/154 (16%)
NPS region. /evidence=ECO:0000250 486..505 0/18 (0%)
BID region. /evidence=ECO:0000250 526..581 13/58 (22%)
BET 611..675 CDD:435704
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 676..1126
PHA03247 <793..1231 CDD:223021
C-terminal (CTD) region. /evidence=ECO:0000250 1051..1401
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1156..1378
TPH <1265..1308 CDD:464007
BRD4_CDT 1359..1401 CDD:465349
Blue background indicates that the domain is not in the aligned region.

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