DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-1 and crebbpa

DIOPT Version :9

Sequence 1:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_005161826.1 Gene:crebbpa / 566841 ZFINID:ZDB-GENE-050208-439 Length:2350 Species:Danio rerio


Alignment Length:587 Identity:119/587 - (20%)
Similarity:203/587 - (34%) Gaps:202/587 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PNRPGRRTNILEELKS----VLNCLWR-NRFSYHFRHPVDSVSLGVPDYHAVVKHPMDLSTIRKR 93
            |::..|:....|||:.    .|..|:| :..|..||.|||.:.||:|||..:||:|:|||||:::
Zfish   970 PSQSRRKIFKPEELRQALMPTLESLYRQDPESLPFRQPVDPILLGIPDYFDIVKNPIDLSTIKRK 1034

  Fly    94 LHNKYYWQASEALEDFKLIFDNCLLYNLEGSPVYQAGKLLMEAFYMRMESIDLSTEVELKPKSEK 158
            |....|.:..:.::|..|:|:|..|||.:.|.||:....|.|.|           |.|:.|..: 
Zfish  1035 LDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKYCSKLAEVF-----------EQEIDPVMQ- 1087

  Fly   159 RKRKATESLDQASTSFSAPRASNNYSRQWLSSSSSWLCPPPMPGGVSSF-------NPSFRNFVG 216
                        ...:...| ...:|.|.|......||..|..|...|:       ...|....|
Zfish  1088 ------------GLGYCCGR-KYEFSPQTLCCYGKQLCTIPRDGTYYSYQNRYHFCEKCFNEIQG 1139

  Fly   217 PSLIPSFMPDSLVNPMQSMHPMSSMMNPIFKNNWE--TNEAMDPPPSEP-------------ISY 266
            .|:.   :.|....| |:|         |.|:.:|  .|:.:||.|...             :.|
Zfish  1140 DSVT---LGDDPAQP-QTM---------ISKDQFERKKNDTLDPEPFVECKDCGRKMHQICVLHY 1191

  Fly   267 RPLDSLAAPLPSPPMEPMTLPWPT------------------------------PAPVESPASSP 301
            ..:                  ||:                              ...:|...:..
Zfish  1192 EVI------------------WPSGFICDNCLKKSAKSRKENKFTAKRLQSTRLGTYIEDRVNKY 1238

  Fly   302 PPAPNPP-----IIICYKSLDRMIEKSHSDHLLKSMVKRK-------------RKQVTWAFNQAD 348
            ....|.|     .:....|.|:.:|       :|..:|.|             |.:..:||.:.|
Zfish  1239 LKRQNHPEAGEVFVRVVASSDKTVE-------VKPGMKAKFVDTGEMMEAFPYRTKALFAFEEID 1296

  Fly   349 ---------YWRRYSQNPDYDHDREEKLDWKILQERLDSDNF------------ESFDGFVSSVR 392
                     :.:.|..:..:.:.|...:.:      |||.:|            |...|::..|:
Zfish  1297 GVDVCFFGMHVQEYGSDCPFPNTRRVYISY------LDSIHFFKPRMLRTAVYHEILIGYLEYVK 1355

  Fly   393 KM---FQNALRCFPEDGLVKVSVKKTNEIF-----EKRLPK-------YRELIATAKEKGRQLVA 442
            |:   ..:...|.|.:|        .:.||     ::::||       ||:::  .|....:::.
Zfish  1356 KLGYVTAHIWACPPSEG--------DDYIFHCHPADQKIPKPKRLQEWYRKML--DKAFAERILH 1410

  Fly   443 SREQDFRDSQNLLIKQENANKNFKG--WVPKPFIIKTESL--FVQEQRVYKMEPQ----DVQEFS 499
            ..:..|:.:....:...|....|:|  |   |.::: ||:  ..||:...|.|..    :..|.:
Zfish  1411 DYKDIFKQATEDRLTSANELPYFEGDFW---PNVLE-ESIKELEQEEEERKKEENTAACETPEGT 1471

  Fly   500 PG 501
            ||
Zfish  1472 PG 1473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 41/108 (38%)
Bromodomain 328..423 CDD:413371 22/136 (16%)
crebbpaXP_005161826.1 zf-TAZ 325..392 CDD:280324
KIX 548..628 CDD:280354
PHA03193 <751..919 CDD:177555
Bromo_cbp_like 980..1087 CDD:99927 43/117 (37%)
RING_CBP-p300 1099..1171 CDD:276805 20/84 (24%)
PHD_CBP 1172..1206 CDD:277117 4/51 (8%)
HAT_KAT11 1235..1542 CDD:285432 47/266 (18%)
ZZ_CBP 1598..1638 CDD:239077
ZnF_TAZ 1659..1737 CDD:214717
Med15 1902..>2333 CDD:255446
Creb_binding 1957..2043 CDD:286163
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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