DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbrd-1 and bptf

DIOPT Version :9

Sequence 1:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_009297692.1 Gene:bptf / 324479 ZFINID:ZDB-GENE-030131-3200 Length:2900 Species:Danio rerio


Alignment Length:149 Identity:49/149 - (32%)
Similarity:72/149 - (48%) Gaps:36/149 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EELKSVLNCLWRNRFSYHFRHPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYWQASEALEDF 109
            |.||.:|..|..::.::.|..|||...  .|||:.::|.||||||:.:|:..::|.:.:|.:.|.
Zfish  2788 EGLKRILRSLQSHKMAWPFLEPVDPND--APDYYGIIKEPMDLSTMEERIQKRFYSKLTEFVADM 2850

  Fly   110 KLIFDNCLLYNLEGSPVYQAGKLLMEAFYMRMESIDLSTEVELKPKSEKRKRKATESLDQASTSF 174
            ..|||||..||...||.||..:.| |:|::                   :|.||          |
Zfish  2851 TKIFDNCRYYNPSDSPFYQCAEFL-ESFFV-------------------QKLKA----------F 2885

  Fly   175 SAPRASNNYSRQWLSSSSS 193
            .|.|:.||.    |.||:|
Zfish  2886 KASRSHNNK----LQSSAS 2900

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 37/97 (38%)
Bromodomain 328..423 CDD:413371
bptfXP_009297692.1 DDT 198..254 CDD:280886
WHIM1 296..345 CDD:292246
PHD1_BPTF 349..391 CDD:277034
WHIM2 414..439 CDD:292247
PP28 <1833..1881 CDD:287254
PHD2_3_BPTF 2665..2711 CDD:277035
PHD2_3_BPTF 2723..2769 CDD:277035
Bromo_gcn5_like 2785..2885 CDD:99941 40/128 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.