DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-1 and fs(1)h

DIOPT Version :9

Sequence 1:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster


Alignment Length:600 Identity:149/600 - (24%)
Similarity:228/600 - (38%) Gaps:205/600 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NSNQPPPRNEPYLQPVNGIVQPPVIPPPNRPGRRTNILEEL-KSVLNCLWRNRFSYHFRHPVDSV 70
            :|::||||.||.::|||||||||||||..||||.||.|:.| |:|:..:|::.||:.|:.|||:.
  Fly     2 SSSEPPPRYEPPVEPVNGIVQPPVIPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAK 66

  Fly    71 SLGVPDYHAVVKHPMDLSTIRKRLHNKYYWQASEALEDFKLIFDNCLLYNLEGSPVYQAGKLLME 135
            .|.:||||.::|.|||:.||:|||.|.|||.|.|.::||..:|:||.:||..|..|....:.|.:
  Fly    67 KLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEK 131

  Fly   136 AFYMRMESIDLSTEVELKP---KSEKRKRKATESLDQASTSFSAPRASNNYSRQWLS-------- 189
            .|..::||:. ..|:||:|   |..|:|::|..:...:|....|...|...|....|        
  Fly   132 VFLQKIESMP-KEELELEPVTAKGGKKKQRAPATPKSSSGGAGASTGSGTSSAAVTSGPGSGSTK 195

  Fly   190 ----------------------SSSSWLCPPPMPGG----------VSSFNPSFRNFVG--PSLI 220
                                  |||:   |...||.          ||:...:..:..|  ||:.
  Fly   196 VSVAASSAQQSGLQGATGAGGGSSST---PGTQPGSGAGGAIAARPVSAMGGTVSSTAGGAPSIP 257

  Fly   221 P-SFMPDSLV-----------------------NPMQSMHPMSSMMNPIFKNNWETNEAMDPPPS 261
            | |.||...|                       || .:...|:|::|.     .:|......|..
  Fly   258 PISTMPPHTVPGSTNTTTTAMAGGVGGPGAAGANP-NAAALMASLLNA-----GQTGAYPGAPGQ 316

  Fly   262 EPISYRPL--DSLAA--------------------------PLPS-------------------- 278
            ..::...|  .|.||                          .:|:                    
  Fly   317 TAVNSSSLLDGSTAAVAAAAAAAAAAAAAAGGAAGAAGGAGTIPAVAVNAANAVQAYVNAGVSVG 381

  Fly   279 -----PPMEPMTL----------PWPTPAPVESPAS----------------------------- 299
                 ||.:|..:          ..||....|||.:                             
  Fly   382 VDAVIPPQQPAKIKKGVKRKADTTTPTANAFESPYTQMDSKSAKIATRRESNRQVIGKKGSGYNM 446

  Fly   300 SPPPAPNPP-----------IIICYKSLDRMIEKSHS-DHLLKSMVKRKRKQVTWAFNQA----- 347
            ||......|           .:...|:.:::.:...| :.:||.:..:|.....|.|.:.     
  Fly   447 SPLGVSGVPGLGGLVAGGVAGVAVAKNKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEM 511

  Fly   348 ----DYWRRYSQNPDYDHDREEK-LDWKILQERLDSDNFESFDGFVSSVRKMFQNALRCFPEDGL 407
                ||           ||..:| :|...::.::|:..::|...|.:.||.:|.|..:..|.|..
  Fly   512 LGLHDY-----------HDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHD 565

  Fly   408 VKVSVKKTNEIFEKR 422
            |....:|..::||.|
  Fly   566 VVAMGRKLQDVFEMR 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 45/104 (43%)
Bromodomain 328..423 CDD:413371 24/104 (23%)
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929 46/105 (44%)
COG5076 387..>593 CDD:227408 37/204 (18%)
Bromo_Brdt_II_like 481..581 CDD:99930 25/110 (23%)
BET 951..1015 CDD:293640
BRD4_CDT <2026..2046 CDD:293710
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 1 1.000 - - mtm8402
orthoMCL 1 0.900 - - OOG6_100249
Panther 1 1.100 - - P PTHR22880
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.810

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