DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-1 and brd2a

DIOPT Version :10

Sequence 1:NP_651190.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_571275.2 Gene:brd2a / 30445 ZFINID:ZDB-GENE-990415-248 Length:836 Species:Danio rerio


Alignment Length:494 Identity:114/494 - (23%)
Similarity:179/494 - (36%) Gaps:166/494 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PVIPPPNRPGRRTNILEEL-KSVLNCLWRNRFSYHFRHPVDSVSLGVPDYHAVVKHPMDLSTIRK 92
            |.:..|:|.||.||.|:.| |:::..|||:.|::.|..|||:..|.:|||:.::|.|||:.||:|
Zfish    62 PAVRDPSRQGRMTNQLQFLQKALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKK 126

  Fly    93 RLHNKYYWQASEALEDFKLIFDNCLLYNLEGSPVYQAGKLLMEAFYMRMESIDLSTEVELK---- 153
            ||.|.||..|||.::||..:|.||.:||.....:....:.|.:||   ::.:....|||.:    
Zfish   127 RLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAF---LQKVAQMPEVEEEIPAP 188

  Fly   154 -PKSEKRKRKATESLDQA--STSFSAPRASNNYSRQWLSSSSSWLCPPPMPGGVSSFNPSFRNFV 215
             |:.::.|.|..:.|...  :|:...|.         :||.|.....||.|.             
Zfish   189 VPRGKQSKPKKGQKLFSGGITTAHQVPA---------ISSLSQLAYSPPTPD------------- 231

  Fly   216 GPSLIPSFMPDSLVN-PMQSMHPMSSMMNPIFKNNWETNEAMDPPPSEPISYRPLDSLAAPLPSP 279
                    .|||::: |.|::         |.||        .|||       ||.|..|.|..|
Zfish   232 --------TPDSVLSTPPQTL---------ITKN--------FPPP-------PLHSTPALLGLP 264

  Fly   280 PMEP------------------------------------------------------------- 283
            |.:|                                                             
Zfish   265 PTQPTAKKKGVKRKADTTTPTTTVMPLTLGVGGMGMGMGMGMSMGMGMGMGLGGDSPLTLSNMGM 329

  Fly   284 -----------MTLPWPTPA-------PVESPASSPPPAPNPPIIICYKSLDRMIEKSHSDHLLK 330
                       |:|....||       |::.|....|.:.|....:....|.:.:.  :...:||
Zfish   330 DSKQSLSLSLGMSLEDKVPARRGGSGRPIKPPRKDLPDSQNQHQPVRRGKLSQQLR--YCSTILK 392

  Fly   331 SMVKRKRKQVTWAFNQA---------DYWRRYSQNPDYDHDREEKLDWKILQERLDSDNFESFDG 386
            .::.:|.....|.|.:.         ||         ||... ..:|...::.::|...:.....
Zfish   393 ELLSKKHTAYAWPFYKPVDVSSLGLHDY---------YDIIM-YPMDLSTIKRKMDHREYRDALQ 447

  Fly   387 FVSSVRKMFQNALRCFPEDGLVKVSVKKTNEIFEKRLPK 425
            |.:.||.||.|..:..|.|..|....::..::||.|..|
Zfish   448 FAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAK 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_651190.1 Bromodomain 39..143 CDD:445827 43/104 (41%)
Mucin15 139..>291 CDD:406167 36/231 (16%)
Bromodomain 328..423 CDD:445827 22/103 (21%)
brd2aNP_571275.2 Bromo_Brdt_I_like 72..178 CDD:99929 43/108 (40%)
Bromo_Brdt_II_like 383..484 CDD:99930 22/112 (20%)
BET 676..740 CDD:435704
Blue background indicates that the domain is not in the aligned region.

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