DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-1 and F22F1.3

DIOPT Version :9

Sequence 1:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_509376.2 Gene:F22F1.3 / 184851 WormBaseID:WBGene00017715 Length:245 Species:Caenorhabditis elegans


Alignment Length:142 Identity:36/142 - (25%)
Similarity:47/142 - (33%) Gaps:49/142 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SNQPP-------------PRNEPYLQPVNGIVQPPVIPPPNRPGRRTNILEELKSVLNCLWRNRF 59
            ||.||             .|:|.||      :.|..:..||...|.|.             |.|.
 Worm    98 SNIPPSHELADFLGLSAQERDEFYL------LHPHRLLKPNAKSRITR-------------RIRI 143

  Fly    60 SYHFRHPVDSVSL---GVPDYHAVVKHPMDLSTIRKRLHNKYYWQASEALEDFKLIFDNCLLYNL 121
                 |.:|.:.|   ..||.:|.....||  .|.::|.|      .|| |.|:...|....|||
 Worm   144 -----HVIDKLGLMLFPAPDQNAYYDGRMD--RIIRKLRN------LEA-EAFRECIDCDDYYNL 194

  Fly   122 EGSPVYQAGKLL 133
            .....|:..|.:
 Worm   195 ASIKAYKLHKTM 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 25/98 (26%)
Bromodomain 328..423 CDD:413371
F22F1.3NP_509376.2 KIX 7..87 CDD:280354
KIX 128..208 CDD:280354 27/106 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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