DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-1 and F13C5.2

DIOPT Version :10

Sequence 1:NP_651190.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_508124.1 Gene:F13C5.2 / 180410 WormBaseID:WBGene00017423 Length:374 Species:Caenorhabditis elegans


Alignment Length:173 Identity:58/173 - (33%)
Similarity:80/173 - (46%) Gaps:40/173 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PPNRPGRR-------------TNILEELKSVLNCL------WRNRFSYHFRHPVDSVSLGVPDYH 78
            ||.:.||:             .::.:|||..|:.|      ..:.|::.||.|||.|.||:.|||
 Worm    92 PPAKRGRKKKAKSESEDEAESDHLHDELKKCLSILKEFEKSTHDSFTFPFRKPVDVVLLGLTDYH 156

  Fly    79 AVVKHPMDLSTIRKRLHNKYYWQASEALEDFKLIFDNCLLYNLEGSPVYQAGKLLMEAFYMR--- 140
            .|:|.|||:|||||:|..:.|..|.|..|||||:.:|||.||.||.||........:.|..:   
 Worm   157 EVIKKPMDMSTIRKKLIGEEYDTAVEFKEDFKLMINNCLTYNNEGDPVADFALQFRKKFAAKWKK 221

  Fly   141 ------------------MESIDLSTEVELKPKSEKRKRKATE 165
                              .::.|...||:.|.|.|:.|....|
 Worm   222 EFPEDGDSFGQEKGEKEGSDNEDDEEEVDEKEKEEEVKEDNAE 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_651190.1 Bromodomain 39..143 CDD:445827 47/143 (33%)
Mucin15 139..>291 CDD:406167 8/48 (17%)
Bromodomain 328..423 CDD:445827
F13C5.2NP_508124.1 Bromodomain 118..219 CDD:445827 46/100 (46%)
Blue background indicates that the domain is not in the aligned region.

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