DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-1 and cbp-1

DIOPT Version :9

Sequence 1:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_499160.2 Gene:cbp-1 / 176380 WormBaseID:WBGene00000366 Length:2017 Species:Caenorhabditis elegans


Alignment Length:559 Identity:112/559 - (20%)
Similarity:183/559 - (32%) Gaps:211/559 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QSNSNQPPP----------RNEPYLQPVNGIVQPPVIPPPNRPGRRTNILEELKSVLNCLWRNRF 59
            :.:|||.||          .::|..|.......||  |..:....:.::::.|..|...|.::..
 Worm   823 EESSNQAPPSVKDTKDGVAESKPKEQQAKREPTPP--PTEDTVFSQEDLIKFLLPVWEKLDKSED 885

  Fly    60 SYHFRHPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYWQASEALEDFKLIFDNCLLYNLEGS 124
            :..||.|||:..|.:||||.::|.||||.|:.|:|:...|..|.:..:|..|:.||..|||.:.|
 Worm   886 AAPFRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNAGQFCDDIWLMLDNAWLYNRKNS 950

  Fly   125 PVYQAGKLLMEAFYMRMESIDLS-----------TEVELKPKSEKRKRKATES----LDQASTSF 174
            .||:.|..|.|.|...|:.:..|           |.:.|..........|.|.    .:|:||.:
 Worm   951 KVYKYGLKLSEMFVSEMDPVMKSMGYCCAKKLAFTPLSLFCYGAAMCTIAREQQYWVFEQSSTQY 1015

  Fly   175 SAPRASN-NYSRQWLSSSSSWLCPPPMPGGVS-SFNPSFRNFVGPSLIPSFMPDSLVNPMQSMHP 237
            :...... .|.::...:     .||.   |:| |.||:.||                    :|.|
 Worm  1016 NVTVTERYTYCQKCFDA-----LPPE---GISLSENPNDRN--------------------NMAP 1052

  Fly   238 MSSMMNPIFKNNWETNEAMDPPPSEPISYRPLDSLAAPLPSPPMEPMTLPWPTPAPVESPASSPP 302
            .:|...       :.|..:|..|.|...|                                    
 Worm  1053 KTSFTE-------QKNSVIDYEPFERCKY------------------------------------ 1074

  Fly   303 PAPNPPIIICYKSLDRMI----EKSHSDHLLKSMVKRKRKQVTWAFNQADYWRRYSQNPDYDHDR 363
                     |.:...|:.    :|.:.:..:....:..:|.               |.||     
 Worm  1075 ---------CMRKWHRICALHDKKVYPEGFICECCRTAKKY---------------QKPD----- 1110

  Fly   364 EEKLDWKILQERLDSDNFESFDGFVSSVRKMFQNALRCFPEDGLVKVSVKKTNEIFEKRLP---- 424
                                 :.:::|  |:..|.|..|.||        :.|...:|:|.    
 Worm  1111 ---------------------NKYLAS--KLPHNKLSTFLED--------RVNGFIKKQLQAEAH 1144

  Fly   425 KYRELIAT--AKEKGRQLVASREQDFRDSQNLLIKQENANKNFKGWVPKPFIIKTESLF------ 481
            ||..:|.|  .::|..::.|..:|.:.:|...               |:.|..:|:::|      
 Worm  1145 KYPVIIRTLCVQDKEAEVKAQMKQKYVESNQF---------------PEKFPYRTKAVFAFEIID 1194

  Fly   482 ----------VQE----------QRVYKMEPQDVQEFSP 500
                      |||          :|||......|..|.|
 Worm  1195 GVEVCFFGLHVQEYGSACPAPNARRVYIAYLDSVHFFQP 1233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 38/103 (37%)
Bromodomain 328..423 CDD:413371 13/94 (14%)
cbp-1NP_499160.2 ZnF_TAZ 415..505 CDD:214717
KIX 593..673 CDD:280354
Bromo_cbp_like 866..972 CDD:99927 38/105 (36%)
DUF902 970..1009 CDD:283620 5/38 (13%)
RING_CBP-p300 984..1067 CDD:276805 22/117 (19%)
PHD_CBP_p300 1069..1100 CDD:277032 5/75 (7%)
HAT_KAT11 1131..1427 CDD:295182 24/118 (20%)
ZZ_CBP 1497..1535 CDD:239077
ZnF_TAZ 1551..1629 CDD:214717
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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