DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-1 and cecr2

DIOPT Version :9

Sequence 1:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_031754453.1 Gene:cecr2 / 100486642 XenbaseID:XB-GENE-6461178 Length:1235 Species:Xenopus tropicalis


Alignment Length:628 Identity:137/628 - (21%)
Similarity:195/628 - (31%) Gaps:223/628 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 VLNCLWRNRFSYHFRHPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYWQASEALEDFKLIFD 114
            ||:.:..::.|:.|..|||...  .|:|:.::..|||||.:.:||.:.||....:.:.|.|:||.
 Frog   409 VLDAVKAHKDSWPFLEPVDESY--APNYYNIITCPMDLSRVEQRLCSGYYLTKEQFVNDMKIIFK 471

  Fly   115 NCLLYNLEGSPVYQAGKLLMEAFYMRM---------ESIDLST--EVELKPKSEKRK-------- 160
            ||..||.:.|...:....|...|...|         || |..|  .||.|.:..|||        
 Frog   472 NCAKYNGQDSEYTEMADNLERCFKKAMLKHLPEDEGES-DGETWIHVEEKERPLKRKSLGRRSKV 535

  Fly   161 ---RKATESLDQASTSFSAPRASNNYSRQWLSSSSSWLCPP----PMP-----GGVSSFNPSFRN 213
               :|:.:..::...|..:.|||.:..||  ..|.....||    |.|     ||::      |.
 Frog   536 GGWQKSRDDSERKRQSSESSRASPSTPRQ--EESERHYGPPAMASPYPHQLHYGGMA------RQ 592

  Fly   214 FVGPSLIPS---------------------FMPDSLVNPMQSMH----------PMSSMMNPIFK 247
            .:.|..:||                     |....|.:|:|...          |.:|..||.  
 Frog   593 SLHPRDMPSAPGMQAPLRSSEPGLSYGALRFPEPQLGDPVQQTQSYRTQASPDVPEASDSNPA-- 655

  Fly   248 NNWETNEAMDPPPSE-------------------PISYRPLDSLAAPLPS---PPMEPMTLP--- 287
             |:..:.....||:.                   |:.|.|  .:...||.   ||..|.:.|   
 Frog   656 -NFRHSRGPHVPPNSARMSGPSQEGGRLYPQAQYPMGYMP--QMRPGLPDGRVPPQGPGSAPFQL 717

  Fly   288 ------W-----PTP----APVE------------------------------------SPASSP 301
                  |     |.|    ||::                                    |..|.|
 Frog   718 GQPSAAWNGNCPPRPQQYGAPMDPRMVRPPDSVCNGRNTFGSAGNSMMDSPEMVAMQRLSSLSGP 782

  Fly   302 P---------PAPNPPI---------IICYKSLDRMIEKSHSDHLLKSMVKRKRKQVTWAFNQA- 347
            |         |||.||.         .:|..|.....:.:.......|....|.|....|..|| 
 Frog   783 PSSAYPLPLGPAPYPPSGAPGTMNGPDMCQPSAVNRAKTTAPGDKASSPGDSKPKSPPTAPTQAL 847

  Fly   348 ----DYWRRYSQ-------NPDYDHDREEKLDWKILQERLDSDNFESFDGFVSSVRKMFQNALRC 401
                |......|       ||.....|:::..|        .....:.||..|:..:...||:..
 Frog   848 MNGDDGPSPLPQVPPPNQGNPGVGAFRDQEKQW--------GPTGGTQDGASSAPHQGPNNAVEG 904

  Fly   402 FPEDGLVKVSVKKTNEIFEKRLPKYRELIATAKEKGRQLVASREQDFRDSQNLLIKQENANKN-- 464
            ..|.|..|.|:|:.        ||...:.|..|:     ||..:.......||......|:.|  
 Frog   905 TAEVGQSKESLKEA--------PKSEPITAPRKD-----VARPQPGAETVSNLATLLSTASHNPG 956

  Fly   465 ---FKGWVPKPFIIKTESLFVQEQRVYKMEPQDVQEFSPGTEP 504
               ..|..|.||         ..||.....||    .:||:.|
 Frog   957 VVRPPGAYPSPF---------PPQRYGNGHPQ----IAPGSYP 986

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 30/101 (30%)
Bromodomain 328..423 CDD:413371 22/106 (21%)
cecr2XP_031754453.1 DDT 6..61 CDD:397084
Bromo_gcn5_like 401..501 CDD:99941 30/93 (32%)
PHA03247 <624..1071 CDD:223021 78/402 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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