DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbrd-1 and baz2a

DIOPT Version :9

Sequence 1:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_002934572.1 Gene:baz2a / 100126219 XenbaseID:XB-GENE-965900 Length:1695 Species:Xenopus tropicalis


Alignment Length:145 Identity:47/145 - (32%)
Similarity:66/145 - (45%) Gaps:23/145 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QSNSNQPPPRNEPYLQPVNGIVQPPVIPPPNRPGRRTN-----------ILEELKSVLNCLWRNR 58
            :.||...|.|...:  |......|...|...|....|.           ||.||:|       :.
 Frog  1547 KENSPAKPSRRREH--PTTSQYSPGESPVSKRRRMATRSHSPDLTFCEIILMELES-------HE 1602

  Fly    59 FSYHFRHPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYWQASEALEDFKLIFDNCLLYNLEG 123
            .::.|..||:...  ||.|..::|:|||.||||.:|.|..|....|..||.:|:|.||.|:|.:.
 Frog  1603 DAWPFLEPVNPRL--VPGYRKIIKNPMDFSTIRHKLLNGKYSSCEEFAEDAELVFSNCQLFNEDD 1665

  Fly   124 SPVYQAGKLLMEAFY 138
            |.|.:|| |:::.||
 Frog  1666 SEVGKAG-LILKKFY 1679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 39/111 (35%)
Bromodomain 328..423 CDD:413371
baz2aXP_002934572.1 HAT_MBD 424..496 CDD:238691
DDT 699..757 CDD:367184
WSD 951..>978 CDD:373967
WSD <1233..1269 CDD:373967
PHD_BAZ2A 1475..1521 CDD:277099
Bromo_BAZ2A_B_like 1587..1683 CDD:99935 38/103 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.