DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIA-S and TOA2

DIOPT Version :9

Sequence 1:NP_524467.1 Gene:TfIIA-S / 42822 FlyBaseID:FBgn0013347 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_012865.1 Gene:TOA2 / 853807 SGDID:S000001541 Length:122 Species:Saccharomyces cerevisiae


Alignment Length:117 Identity:45/117 - (38%)
Similarity:69/117 - (58%) Gaps:15/117 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKAGKLNTYR 67
            |:|||.:|:||:|.::||.||..|:|...||.:||..|||.:...|....::::|.| |.|:||.
Yeast     7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVK-GNLDTYG 70

  Fly    68 FCDNVWTLMLND--VEFREVH------------EIVKVDKVKIVACDGKSGE 105
            |||:|||.::.:  |...:.|            .::.|||::||||:.|..|
Yeast    71 FCDDVWTFIVKNCQVTVEDSHRDASQNGSGDSQSVISVDKLRIVACNSKKSE 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIA-SNP_524467.1 TOA2 3..105 CDD:227452 44/115 (38%)
TOA2NP_012865.1 TOA2 3..122 CDD:227452 44/115 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344996
Domainoid 1 1.000 46 1.000 Domainoid score I3061
eggNOG 1 0.900 - - E1_COG5123
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3304
Inparanoid 1 1.050 84 1.000 Inparanoid score I1597
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55551
OrthoFinder 1 1.000 - - FOG0003136
OrthoInspector 1 1.000 - - otm46751
orthoMCL 1 0.900 - - OOG6_103706
Panther 1 1.100 - - LDO PTHR10966
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1463
SonicParanoid 1 1.000 - - X2529
TreeFam 1 0.960 - -
1514.790

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