DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIA-S and gtf2a2

DIOPT Version :9

Sequence 1:NP_524467.1 Gene:TfIIA-S / 42822 FlyBaseID:FBgn0013347 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_001005107.1 Gene:gtf2a2 / 448686 XenbaseID:XB-GENE-990822 Length:109 Species:Xenopus tropicalis


Alignment Length:103 Identity:80/103 - (77%)
Similarity:91/103 - (88%) Gaps:1/103 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKAGKLNT 65
            |:|||||||||||:||||||||||..||.|.||.:|||||||:||:||.|||:.||.|: |.|||
 Frog     1 MAYQLYRNTTLGNSLQESLDELIQSQQINPQLALQVLLQFDKAINSALAQRVRNRVNFR-GSLNT 64

  Fly    66 YRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKS 103
            |||||||||.:|||||||||.::||||||||||||||:
 Frog    65 YRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKN 102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIA-SNP_524467.1 TOA2 3..105 CDD:227452 79/101 (78%)
gtf2a2NP_001005107.1 TOA2 3..103 CDD:227452 79/101 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 79 1.000 Domainoid score I8576
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3304
Inparanoid 1 1.050 161 1.000 Inparanoid score I4129
OMA 1 1.010 - - QHG55551
OrthoDB 1 1.010 - - D1589933at2759
OrthoFinder 1 1.000 - - FOG0003136
OrthoInspector 1 1.000 - - oto105530
Panther 1 1.100 - - LDO PTHR10966
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1463
SonicParanoid 1 1.000 - - X2529
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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