DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIA-S and SPCC553.11c

DIOPT Version :9

Sequence 1:NP_524467.1 Gene:TfIIA-S / 42822 FlyBaseID:FBgn0013347 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_587763.2 Gene:SPCC553.11c / 2538859 PomBaseID:SPCC553.11c Length:109 Species:Schizosaccharomyces pombe


Alignment Length:97 Identity:49/97 - (50%)
Similarity:73/97 - (75%) Gaps:1/97 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKAGKLNTYR 67
            |:|||.:::|.:|.::||:||..|:|:|.||.|||..||||:..||.::|::|:||| |.|:|||
pombe     5 YELYRRSSIGISLTDALDDLISQGKISPQLAMKVLFNFDKSMTEALAEKVRSRLTFK-GHLDTYR 68

  Fly    68 FCDNVWTLMLNDVEFREVHEIVKVDKVKIVAC 99
            |||.|||.::.:..||..:|.|..:|::||||
pombe    69 FCDEVWTFIIKNPSFRFDNETVTSNKIRIVAC 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIA-SNP_524467.1 TOA2 3..105 CDD:227452 49/97 (51%)
SPCC553.11cNP_587763.2 TOA2 1..106 CDD:227452 49/97 (51%)
TFIIA_gamma_N 4..52 CDD:199901 24/46 (52%)
TFIIA_gamma_C 54..100 CDD:280847 23/46 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I3268
eggNOG 1 0.900 - - E1_COG5123
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3304
Inparanoid 1 1.050 104 1.000 Inparanoid score I1625
OMA 1 1.010 - - QHG55551
OrthoFinder 1 1.000 - - FOG0003136
OrthoInspector 1 1.000 - - otm47205
orthoMCL 1 0.900 - - OOG6_103706
Panther 1 1.100 - - LDO PTHR10966
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1463
SonicParanoid 1 1.000 - - X2529
TreeFam 1 0.960 - -
1413.860

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