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Protein Alignment TfIIA-S and gtf-2A2
DIOPT Version :9
Sequence 1: | NP_524467.1 |
Gene: | TfIIA-S / 42822 |
FlyBaseID: | FBgn0013347 |
Length: | 106 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_499644.1 |
Gene: | gtf-2A2 / 176682 |
WormBaseID: | WBGene00013736 |
Length: | 113 |
Species: | Caenorhabditis elegans |
Alignment Length: | 102 |
Identity: | 49/102 - (48%) |
Similarity: | 70/102 - (68%) |
Gaps: | 0/102 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 SYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKAGKLNTY 66
:||||||||||..||::||:.:....|...|:.|::..||||||..|..:.|.:|.|:|.||..|
Worm 5 NYQLYRNTTLGQALQKTLDDFVGDQMIPDSLSKKIMDSFDKSINKILPHKAKNKVNFRADKLRAY 69
Fly 67 RFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKS 103
|:||||||.::..::.|:..|...||::|||||||::
Worm 70 RYCDNVWTFIVEQIDLRDAVEGGTVDRLKIVACDGQT 106
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
57 |
1.000 |
Domainoid score |
I7288 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5123 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
1 |
1.000 |
- |
- |
|
H3304 |
Inparanoid |
1 |
1.050 |
106 |
1.000 |
Inparanoid score |
I3505 |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG55551 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1589933at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0003136 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm14768 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_103706 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR10966 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R1463 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X2529 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
14 | 13.910 |
|
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