DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4G2 and eif4g2a

DIOPT Version :9

Sequence 1:NP_001287489.1 Gene:eIF4G2 / 42819 FlyBaseID:FBgn0260634 Length:2072 Species:Drosophila melanogaster
Sequence 2:NP_001014311.1 Gene:eif4g2a / 323453 ZFINID:ZDB-GENE-030131-2173 Length:891 Species:Danio rerio


Alignment Length:993 Identity:208/993 - (20%)
Similarity:351/993 - (35%) Gaps:298/993 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1205 GGSSGMGSGSGGGGGISNSSQRHMDIIRVQLSLKEEIKLSE--------CENAWQP--GTLRRVS 1259
            ||:|...:.||||||  ..:.:|         ..:.:..||        ....|.|  .|.|.|:
Zfish     8 GGASRFSASSGGGGG--RGATQH---------YPKSVGNSEFLGKTPGPSVQRWVPSRSTRRDVN 61

  Fly  1260 MAGGQDEDDDVEGVLKKVRGILNKLTPDNFEVLLKEMSSIKMDNEAKMTNVMLLIFEKTISEPNF 1324
            .:..::..|   .:.:|||||||||||:.|:.|..|:.::.:|::..:..::|||.:|.:.||.:
Zfish    62 SSNEKERHD---AIFRKVRGILNKLTPEKFDKLCLELLNVGVDSKLVLKGIILLIVDKALEEPKY 123

  Fly  1325 APTYARFCKVLFH----------EIKAENK--SLFTSSLITRIQHEFESNVNDANAKSKKLQPTM 1377
            :..||:.|..|..          ||::..|  :.|...||:::|.|||:...:.:...|...|  
Zfish   124 SSLYAQLCLRLAEDAPNFDGPSTEIQSSQKQSTTFRRLLISKLQDEFENRTRNVDIYDKNDSP-- 186

  Fly  1378 ERINQCSDPAKKAELRAEMEDLEYQFRRRAWGTVRFIGELFKLQSLTNDRVLNCVESLLE----- 1437
                          |.:|.|:.....:.:..|.::|||||.||..:....:..|:::|||     
Zfish   187 --------------LTSEEEEQRAIAKIKMLGNIKFIGELGKLDLIHESILHKCIKTLLEKKKRV 237

  Fly  1438 --HGCEEKLEYMCKLLTTVGHLLESSLPEHYQLRDRIEKIFRRIQDIINRSRGTSHRQQVHIKIS 1500
              ....|.||.:|:::.|||..|     :|.:.:..:::.|.|::.::|..           .:.
Zfish   238 QLKDMGEDLECLCQIMRTVGPRL-----DHEKAKSLMDQYFGRMRSLMNNK-----------DLP 286

  Fly  1501 SRVRFMMQDVLDLRLRNW-----------------DQPATHQSG------QQGGRGQRHKQHD-- 1540
            :|:||::||.::||..||                 .|.|....|      .||.|....:::.  
Zfish   287 ARIRFLLQDTVELRENNWVPRKAFIDNGPKTINQIRQDAVKDLGVFIPPMTQGIRTDFFQENSFM 351

  Fly  1541 ---------------DSKDQSHSTGGGRGGGMNQHQQSST-----------HHQHQ--------K 1571
                           |...|...:|.|.|.|:.|.:.|.|           |..|.        |
Zfish   352 PTRIKPDRETLGGLADMFGQMPGSGIGTGPGVIQDRYSPTMGRRTNPLFNGHSGHMAPAPQPFIK 416

  Fly  1572 HNQHGHDGGNYFMQKMPNKQHHENQTLSIDPSKLRFSNSSATDDSIAKLGNSSHYQWRNVGNRPV 1636
            .||    |.|...|...:....:.|:..:.|...:....:|.:.|:                ||.
Zfish   417 SNQ----GQNLLFQNQTHSSQQQAQSKDMPPRFTKKGQLNADEISL----------------RPA 461

  Fly  1637 SSTQVNASNAP----------PPTSLLKRPGQNYKFLPYQQPSAVAGTANAPAGGNKSNVEVNDA 1691
            .|..:|.:..|          ||::...|....    |..||..:....|.|....|....:...
Zfish   462 QSFILNKNQMPKLQPQIPTMIPPSAQPPRTSTP----PLGQPPQLGLKTNPPPIQEKPQKTIKKP 522

  Fly  1692 FDGKQCQGLITK-LVEEALNTREWQPEVLSIWRSHSGSQQSKTLFHLLTDYLHKSTV-----KRQ 1750
            ...|:....:|: :|...|:::.....|       :|.::.|...|.|.:.|.|..:     ..:
Zfish   523 PPAKEELLKMTETVVTSYLSSKNMNDAV-------NGVREMKAPKHFLPEMLSKMIICSLENPDE 580

  Fly  1751 HRQACGNIFAYLMDKDAVEKEIFEEAYSRFGDDFPDLLVDVPNGWGYVFEFLG------------ 1803
            .|:....:...|..:..|..|.|.:|:....|....:.:|||....|:.:|..            
Zfish   581 DREHVSTLINKLRVEGLVSGENFLQAFLNVLDQCSKIELDVPLVKSYLAQFAARAVIAELVSMAE 645

  Fly  1804 ---PIIHSGHL-----------DLKDVWQRRWLDDFFFAERFVYAFVSYFVQEFGAAYARKLWHN 1854
               |:.:..|.           .|||   |.||.|.|              |:......:.|...
Zfish   646 LAHPLENGTHFPLFLLCLQQMAKLKD---REWLTDLF--------------QQSKVNMQKMLPEI 693

  Fly  1855 DYKLDR--------GQLFWSDVRKY-REFVQSHSFYFLDNGPGQNQGHAKVKAPTTPRSPVEHVE 1910
            |...||        |..|...:.|. :|.::                  ::||...|::..:.::
Zfish   694 DQNKDRMLEILEGKGLSFLFPLMKLEKELLK------------------QIKADPAPQTIYKWIK 740

  Fly  1911 RIRHLLAISCDMAIDYINTNVAINDKFVRQL-TRFLCCDFALTVMTNTHNNIKSGGNSKPL--QL 1972
                          |.|:..:..:..||..| |.||...|.....|:....:     |.|.  ||
Zfish   741 --------------DNISPKLHTDRGFVNILMTSFLQYIFHEMYATDDEEQL-----SAPTKEQL 786

  Fly  1973 NTE-----SFRSCCTPLL----RLCIDAQEALEIACIDEAVDALQQHFMTEYEDDMAAGETICST 2028
            :.|     :|:......|    .|.:.|..||::.|   ...|..:..:..|             
Zfish   787 DQEKQLLLAFKPVMQKFLHDHVELQVSALYALQVHC---NAHAFPKGMLLRY------------- 835

  Fly  2029 FSVLYESEVIPKESFDKW 2046
            |...|:.|:|.:|:|..|
Zfish   836 FVNFYDMEIIEEEAFLAW 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4G2NP_001287489.1 EIN3 <270..423 CDD:296674
MIF4G 1274..1514 CDD:280935 69/258 (27%)
MA3 1697..1812 CDD:280933 24/146 (16%)
eif4g2aNP_001014311.1 MIF4G 73..303 CDD:280935 71/261 (27%)
Med25_SD1 376..523 CDD:288132 33/170 (19%)
MA3 529..642 CDD:214714 22/119 (18%)
W2_eIF4G1_like 713..860 CDD:211397 36/194 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0401
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D594395at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23253
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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