DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4G2 and Paip1

DIOPT Version :9

Sequence 1:NP_001287489.1 Gene:eIF4G2 / 42819 FlyBaseID:FBgn0260634 Length:2072 Species:Drosophila melanogaster
Sequence 2:NP_663432.1 Gene:Paip1 / 218693 MGIID:2384993 Length:400 Species:Mus musculus


Alignment Length:341 Identity:71/341 - (20%)
Similarity:129/341 - (37%) Gaps:106/341 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1264 QDEDDDVEGVLKKVRGILNKLT--PDNFEVLLKEMSSIK---MDNEAKMTNVMLLIFEKTISEPN 1323
            :|..:|...:.:.|:..||.||  |.:||..:::.:...   :..:..:..::.||:::..|.||
Mouse    70 EDGCEDYPTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGWVTTDDALQELVELIYQQATSIPN 134

  Fly  1324 FAPTYARFCKVLFHEIKAENKS-LFTSSLITRIQHEFESNVNDANAKSKKLQPTMERINQCSDPA 1387
            |:...||.|..|.|.:....:| .|...|:.|.:.|:|:  .|..||..::.             
Mouse   135 FSYMGARLCNYLSHHLTISPQSGNFRQLLLQRCRTEYEA--KDQAAKGDEVT------------- 184

  Fly  1388 KKAELRAEMEDLEYQFRRRAWGTVRFIGELFKLQSL--TNDRVLNC----------VESLLEHGC 1440
                            |:|....|.|:|||:....:  ||.:|...          :.:|..:..
Mouse   185 ----------------RKRFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLNALFSNPM 233

  Fly  1441 EEKLEYMCKLLTTVGHLLESSLPEHYQLRDRIEKIFRRIQDIINRSRGTSHRQQVHIKISSRVRF 1505
            ::.|....|||...|.:||.:..|  :.:..:|:|.:||::::           :....|..|:.
Mouse   234 DDNLICAVKLLKLTGSVLEDTWKE--KGKTDMEEIIQRIENVV-----------LDANCSRDVKQ 285

  Fly  1506 MMQDVLDLRLRNWDQPATHQSGQQGGRGQRHKQHDDSKDQSHSTGGGRGGGMNQHQQSSTHHQHQ 1570
            |:..:::||..||            ||             .|:|              ||:.:..
Mouse   286 MLLKLVELRSSNW------------GR-------------VHAT--------------STYREAT 311

  Fly  1571 KHNQHGHDGGNYFMQK 1586
            ..|.     .||||.:
Mouse   312 PEND-----PNYFMNE 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4G2NP_001287489.1 EIN3 <270..423 CDD:296674
MIF4G 1274..1514 CDD:280935 54/257 (21%)
MA3 1697..1812 CDD:280933
Paip1NP_663432.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36
PABPC1-interacting motif-2 (PAM2). /evidence=ECO:0000250 37..64
MIF4G 81..297 CDD:280935 56/259 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 356..376
PABPC1-interacting motif-1 (PAM1). /evidence=ECO:0000250 361..400
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0401
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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