DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4G2 and abu-11

DIOPT Version :9

Sequence 1:NP_001287489.1 Gene:eIF4G2 / 42819 FlyBaseID:FBgn0260634 Length:2072 Species:Drosophila melanogaster
Sequence 2:NP_493679.1 Gene:abu-11 / 173404 WormBaseID:WBGene00000034 Length:395 Species:Caenorhabditis elegans


Alignment Length:375 Identity:86/375 - (22%)
Similarity:108/375 - (28%) Gaps:120/375 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PQSTHQQNHNHQAQHH----QATHSHHHHLQQQQEQQQSHAVFVPNHSGLHHHQQQHL------- 67
            ||...|....:.||..    ||.........||.:|||.......:.......|||.:       
 Worm    43 PQCNCQPAQTNTAQQSCSCAQAQQPSSCGCAQQYQQQQCAPTCQSSCEQSCVAQQQPIAQCQSSC 107

  Fly    68 -------------LQQQQQQHQQQAAVAAAHLQQHIQQQQQQQVQA-------------QAQAHH 106
                         |||..||..||...||...||..|||.|||.|.             |.|.:.
 Worm   108 SSTCQSACAQPVQLQQPAQQQCQQDCQAACPQQQQPQQQCQQQCQTTCQSDDQYSQQLIQQQTYA 172

  Fly   107 QPVIF--------YNTQPSYAAHSAAVNNSANGGGATLQ------LSAAASSNTLGHPLTGGHHG 157
            ||...        |||.|.....::..|...|....|.|      ....:|.:....|......|
 Worm   173 QPGQIPAYTGRSEYNTAPPQQQQASQCNTCQNSCLNTCQQQQQPVQQCQSSCDQSCQPQCATPSG 237

  Fly   158 GA-NGVAPGSNMPRALSN---------PTLPPHFQQSAGLIAP-----------AGGNAG----- 196
            .| |.|   :..|:|.:|         |...|.:|.::...||           .||...     
 Worm   238 SAYNQV---NYQPQAQNNYQTNNNYQQPGAIPSYQGASQTAAPTYQPYRDTNVQVGGTISQCNTC 299

  Fly   197 ----GPYISATYIPINQTGPLMG--MQPAVTFPTNGAAGASFYAAAPPPPQQKQLPPTAQQQGPG 255
                .........|:||..|...  .|||.:            .|||..|.|.|    .|.|...
 Worm   300 QTQCNQECQVQQTPVNQCAPQCDAQCQPACS------------PAAPAAPVQTQ----QQIQLTI 348

  Fly   256 GAPGAAQTPTLAYYQLGPNAQNSAGNNVVSGANTHRGNMRGGQRSTPTAQ 305
            ..|.|.|:|     |..|..:.|.....:             |:..|.:|
 Worm   349 NVPVARQSP-----QCQPQCEQSCNTQCI-------------QQQQPISQ 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4G2NP_001287489.1 EIN3 <270..423 CDD:296674 6/36 (17%)
MIF4G 1274..1514 CDD:280935
MA3 1697..1812 CDD:280933
abu-11NP_493679.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1766
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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