DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mbc and dock2

DIOPT Version :9

Sequence 1:NP_001247267.1 Gene:mbc / 42817 FlyBaseID:FBgn0015513 Length:2008 Species:Drosophila melanogaster
Sequence 2:XP_002664298.4 Gene:dock2 / 571408 ZFINID:ZDB-GENE-031125-1 Length:678 Species:Danio rerio


Alignment Length:676 Identity:271/676 - (40%)
Similarity:391/676 - (57%) Gaps:61/676 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  1230 LFETIMLERCAAHNTLNVDGTA-FVQMVTRLMDKLLEYRFIIQDESKENRMACTFSLLQFYSEVD 1293
            |.::|:|: |||...|.::... ||.:||.|:::||:||.::.::|:.|||:||.:||.||.:::
Zfish     3 LLQSILLD-CAAGRPLLLNELQHFVTLVTGLLERLLDYRSVMSEDSRNNRMSCTVNLLNFYKDIN 66

  Fly  1294 LKEMYIRYVNKLCALHMEFENYTEAAFTLKLHTELLRWTDTELSHQLRSYRHNNCRTHRQLKEAL 1358
            .:.|||||:.||..||::.|||||||:||.||::||:|::.:...||   .:...::.|||||:|
Zfish    67 REAMYIRYLYKLRDLHLDGENYTEAAYTLLLHSKLLKWSEEQCLPQL---DYQTPQSQRQLKESL 128

  Fly  1359 YFEIMEYFDKGKQWECAIDMCRVLARQYEEEIFDYLKLAELLNRMALFYEKIIKELRHNSEYFRV 1423
            |..|:.||||||.||.||.:|:.||.|:|.|:|||..|.:.||:.|.|||.|:|.||...:||.|
Zfish   129 YDNIISYFDKGKMWEEAITLCKELADQFEMEVFDYELLGQKLNQQAKFYENIMKILRPKPDYFAV 193

  Fly  1424 CFYGRGFPRFLQNRVYIFRGKEYERHSDFCARMLVQHPQAELMQTLEAPGDDITNSDGQYIQVNK 1488
            .:||.|||.||:|:|:|.|||||||..||.::::.|.|.|..:.....|||||.||:.||||...
Zfish   194 GYYGCGFPPFLRNKVFIHRGKEYERREDFQSQLMSQFPSAVRLNITTMPGDDIKNSNMQYIQCFT 258

  Fly  1489 VEPIMGQAFNKFNDKIINNEIVKYFTANNVQKFQFSRPFRDSTNGGDRDDVRNLWLERTELRISY 1553
            |:|:: :...:..:|.:.::|:.::.:|.||:||:|||.|......| ::..::|:|||....:|
Zfish   259 VQPVL-EIPPRLKNKPVPDQIINFYKSNYVQRFQYSRPVRKGKVDPD-NEFASMWIERTTFITAY 321

  Fly  1554 PLPGILRWFPVVETNTFKISPLERAVEIMKDTNRDIRQLVILHKSDETLHINPLSMKLNGIVDPA 1618
            .||||||||..:......|||||.|:|.|..||..|..::..::.||||.||||||.||||||||
Zfish   322 KLPGILRWFEAINITHTTISPLENAIETMGQTNEKILTMINQYQCDETLPINPLSMLLNGIVDPA 386

  Fly  1619 VMGGFAKYEEAFLTDDYLEQNPDDKELVEELKELIANQIPLLDLAIQLHRLRAPDSLKALQEHLE 1683
            |||||||||:||.||:|..::|||:|.:..||:|||.|||||...|.||.....|.|:...|.:|
Zfish   387 VMGGFAKYEKAFFTDEYTHEHPDDREKLMRLKDLIAWQIPLLGRGIALHGKGVTDDLRPFHERME 451

  Fly  1684 RCFADMQQHVEQRYGRKSCDLKIERDSVVMRRPNSFLPSLFDGSNNRHSETSMGSSDSGLSKSTF 1748
            .||..:::.||:.||.:......||.|.   ||.|.|.|:      |.|..|:..|:.|....| 
Zfish   452 DCFKQLRKKVEKEYGVRELPDMDERRST---RPRSMLRSV------RQSICSLAGSECGTPTKT- 506

  Fly  1749 LPRPQTNSIKN---------PFSGLSFNTRPSLGHSPSIKSNKSKDKTPSKRRTKDGKVKEREAH 1804
              ||::.|:.:         |.|..|.:.....|....:|..|||.|....|.:.....:|:|..
Zfish   507 --RPESVSLDSGVPPSPSIIPRSSGSVSVTDESGVEVEVKLRKSKKKQKKGRGSMIFISEEKERS 569

  Fly  1805 S-----LSSSQWYTPPLSTITSTPEKE--INT----SIASLA-STSNSSLSGPKTPDPHVLTEEL 1857
            |     ||..|.:....:...||....  :|:    :|..|| |.:|.|             || 
Zfish   570 STLDKRLSKKQEFRSDTNLCESTESSSGLVNSKSLPTITGLALSVANGS-------------EE- 620

  Fly  1858 TPKRPLRSEMEKERRLSRPASIATPT 1883
                   :|..:.:|.|:..|:..|:
Zfish   621 -------AESARSKRDSKSVSVCLPS 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mbcNP_001247267.1 SH3_DOCK_AB 14..70 CDD:212805
DOCK_N 86..435 CDD:292790
C2_Dock-A 443..633 CDD:176076
DHR2_DOCK_A 1296..1697 CDD:212570 194/400 (49%)
dock2XP_002664298.4 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D102580at2759
OrthoFinder 1 1.000 - - FOG0000433
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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