Sequence 1: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_054808.1 | Gene: | NUP58 / 9818 | HGNCID: | 20261 | Length: | 599 | Species: | Homo sapiens |
Alignment Length: | 662 | Identity: | 160/662 - (24%) |
---|---|---|---|
Similarity: | 215/662 - (32%) | Gaps: | 206/662 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 FGGAKPSFGATPAA---TSFGG-FSGTTTTTPFGQSAFGKPAAPA-FGN---TSTFAAQPAQQSL 58
Fly 59 FGAAATPAQPAGGLFGANTSTGFGSTATAQPTAFGAFSQPQQTSNIFGSTQTAASTSLFGQSTLP 123
Fly 124 AFGAAKPTMTAFGQTAAAQPT--GSLFGQPAAATSTTGFGGFGTSAPTTTNVFGSGTASAFAQP- 185
Fly 186 ----QATAVGASGVNTGTAVAKYQPTIGTDTLMKSG----QANSVNTKQHCITAMKEFEGKSLEE 242
Fly 243 LRLEDYMC--------------------GRKGPQA--------------------GNAPGAFGF- 266
Fly 267 -----------GAQVTQPAQPASGGLFGSTAQPSTGL-------------FGQTVTENKSMFGTT 307
Fly 308 AFGQQPATNN--------------------AFGAATQ---------QNNFL--QKPFGATTTTPF 341
Fly 342 AAPAADAS------------NPFGAKP---AFGQGGSLF-GQAPATSAAPAFGQTNTGFG-GFGT 389
Fly 390 TAGATQQSTLFGATPAADPNKSAFGLGTAASAATTG---FGFGAPATSTAGGGLFGNKPATSFAA 451
Fly 452 PTFGATSTASTPFSNFGLNTSTAATGGGLFNSGLNKPATSGFGGFGATSAAPLNFNAGNTGGSLF 516
Fly 517 GNTAKPGGGLFG 528 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | 28/88 (32%) |
Nucleoporin2 | 888..1027 | CDD:309287 | |||
Nup96 | 1484..1762 | CDD:314912 | |||
Nucleoporin_FG | <1..74 | CDD:316182 | 29/79 (37%) | ||
Nucleoporin_FG | 50..164 | CDD:316182 | 33/115 (29%) | ||
Nucleoporin_FG | 254..318 | CDD:316182 | 14/128 (11%) | ||
NupH_GANP | 316..>522 | CDD:318883 | 65/256 (25%) | ||
NUP58 | NP_054808.1 | Nucleoporin_FG2 | 3..599 | CDD:406391 | 160/662 (24%) |
14 X 2 AA repeats of F-G | 7..579 | 151/626 (24%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 213..247 | 6/33 (18%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 579..599 | 8/35 (23%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |