Sequence 1: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_012494.3 | Gene: | NSP1 / 853409 | SGDID: | S000003577 | Length: | 823 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 1010 | Identity: | 232/1010 - (22%) |
---|---|---|---|
Similarity: | 339/1010 - (33%) | Gaps: | 339/1010 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 76 NTSTGFGSTATAQPTAFGAF--SQPQQTSNIFGSTQTAASTSLFGQSTLPAFGAAKPTMTAFGQT 138
Fly 139 AAAQPTGSLFGQPAAATSTTGFGGFGTSAPTTTNVFGSGTASAFAQPQATAVGASGVNTGTAVAK 203
Fly 204 YQPTIGTDTLMKSGQANSVNTKQHCITAMKEFEG-----------KSLEELRLEDYMCGRKGPQA 257
Fly 258 GNAPGAFGFGA-----QVTQPAQPA-----SGGLFGSTAQPSTGL-FGQTVTENKSM-------- 303
Fly 304 -FGTTAFGQQPA--------TNN------AFGAATQQNNFLQKPFGATTTTP-FAAPAADASNPF 352
Fly 353 GA--KPAFGQGGSLFGQAPATSAAPAFGQTNTGFGGFGTTA------GATQQSTLFGATPAADPN 409
Fly 410 KSAFGLGTAASAATTGFGFGAPATSTAGGGLFGNKPATSFAA-PTFGATSTASTPFSNFGLNTST 473
Fly 474 AATGGGLFNSGLNKPATSGFGGFGATSAAPLNFNAGNTGGSLFGNTAKPGGGLFGGGTTTLGGTG 538
Fly 539 AAPTGGLFGGGTTSFGGVGGSLGGGGFGMGTNNSLTGGIMGAQPTLGIMTPSHQPIHQQILARVT 603
Fly 604 SPYGDS--PIFKDLKLSSEADATRATNPAAQQAVLDLTSNQYKISTSNNPAPMKVKALGSTLNRK 666
Fly 667 SLFDGLEEFDASVEGFNLKPSAKRLVIKPKVKSVEGGNPSSSIGSAPNTPQSRPK-------GAT 724
Fly 725 PNKERE--------SFSGAIPSEPLPPAGNSPGAT------NGRESQDNGRRESWLHPNNLEKVR 775
Fly 776 QHNIQTGMDQGSPHNSTLNELVPR----------------KPLDT---------------YRPSS 809
Fly 810 TVRLSVSTIPENPFEDQSSTIARRETFTSQQANESVLSNRSNEAEDSAANQSRLAIEAAAAEAAD 874
Fly 875 DESHPTGIVLRRVGYYTIPSLDDLRSYLAEDGSCVVPNFTVGREGYGNV--FFGKEMDVAGLNLD 937
Fly 938 EIV--------HFRNKEIIIYPDDENKPPIGQGLN 964 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | 23/86 (27%) |
Nucleoporin2 | 888..1027 | CDD:309287 | 18/87 (21%) | ||
Nup96 | 1484..1762 | CDD:314912 | |||
Nucleoporin_FG | <1..74 | CDD:316182 | |||
Nucleoporin_FG | 50..164 | CDD:316182 | 32/89 (36%) | ||
Nucleoporin_FG | 254..318 | CDD:316182 | 27/97 (28%) | ||
NupH_GANP | 316..>522 | CDD:318883 | 62/221 (28%) | ||
NSP1 | NP_012494.3 | PHA03255 | 61..>214 | CDD:165513 | 50/187 (27%) |
PTZ00121 | <289..>602 | CDD:173412 | 97/443 (22%) | ||
Nsp1_C | 620..731 | CDD:398645 | 20/122 (16%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |