Sequence 1: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_011343.1 | Gene: | NUP49 / 852703 | SGDID: | S000003140 | Length: | 472 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 557 | Identity: | 150/557 - (26%) |
---|---|---|---|
Similarity: | 196/557 - (35%) | Gaps: | 197/557 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 350 NPFGAKPAFGQGGSLFGQAPATSAAPAFGQTNTGFGGFGTTAGA-TQQST--LFGATPAADPNKS 411
Fly 412 AFGLGTA-----ASAATTGFGFGAPATSTAGGGLFGNKPATSFAAPTFGATSTASTPFSNFGLNT 471
Fly 472 STAATGGGLFNSGLNKPATSGFGGFGATSAAPL--NFNAGNTGGSLFG-NTAKPGGGLFG----G 529
Fly 530 GTTTLGGT-------------GAAPTG-GLFG---GGTTSFGGVGGSLGGGG---FGMGTNN--- 571
Fly 572 -------SLTGGIMGAQPTLGIMTPSHQPIHQQILARVTSPYGDSPIFKDLKLSSEADATRATNP 629
Fly 630 AAQQAVLDLTSNQY---KISTSNNPAPMKVKALGSTLNRKSLFDGLEEFDASVEGFNLK-PSAKR 690
Fly 691 LVIKPKVKSVEGGNPSSSIGSAPNTPQSRPKGATPNKERESFSGAIPSEPLPPAGNS-------- 747
Fly 748 PGATNGRESQDNGRRESWLHPNNLEKVRQHNIQTGMDQGSPHNSTLNELVPRKPLDTYRPSSTVR 812
Fly 813 LSVSTI-------PENPFEDQSSTIARRETFTSQQAN 842 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | 31/92 (34%) |
Nucleoporin2 | 888..1027 | CDD:309287 | |||
Nup96 | 1484..1762 | CDD:314912 | |||
Nucleoporin_FG | <1..74 | CDD:316182 | |||
Nucleoporin_FG | 50..164 | CDD:316182 | |||
Nucleoporin_FG | 254..318 | CDD:316182 | |||
NupH_GANP | 316..>522 | CDD:318883 | 65/182 (36%) | ||
NUP49 | NP_011343.1 | Nucleoporin_FG2 | 29..>289 | CDD:406391 | 98/311 (32%) |
V_Alix_like | <267..465 | CDD:353824 | 46/244 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0845 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |