Sequence 1: | NP_001262885.1 | Gene: | Nup98-96 / 42816 | FlyBaseID: | FBgn0039120 | Length: | 1960 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_176542.1 | Gene: | AT1G63540 / 842659 | AraportID: | AT1G63540 | Length: | 635 | Species: | Arabidopsis thaliana |
Alignment Length: | 756 | Identity: | 178/756 - (23%) |
---|---|---|---|
Similarity: | 255/756 - (33%) | Gaps: | 259/756 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 55 QQSLFGAAAT-------PAQPAGGLFGANTSTGFGSTATAQPT-AFGAFSQPQQTSNIFGSTQTA 111
Fly 112 ASTSLFGQSTLPAFGAAKPTMTAFGQTAAAQPTGSLFGQPAAATSTTGFGGFGTSAPTTTNVFGS 176
Fly 177 GTASAFAQPQATAVGASGVNTGTAVA-KYQPTIGTDTLMKSGQANSVNTKQHCITAMKEFEGKSL 240
Fly 241 EELRLEDYMCGRKGPQAGNAPGAFGFGAQVTQPAQPASGGLFGSTAQPSTGLFGQTVTENKSMFG 305
Fly 306 TTAFGQQP---ATNNAFGAATQQNNFLQKPFGATTTTPFAAPAADASNPFGAKPAFGQGGSLFGQ 367
Fly 368 APATSAAPAFGQTNTGFGGFGTTAGATQQSTLFGATPAADPNKSAFGLGTAASAATTGFGFGAPA 432
Fly 433 TSTAGGGLFGNKPATSFAAPTFGATSTASTPFSNFGLNTSTAATGGGLFNSGLNK-PATSGFGGF 496
Fly 497 GATSAAPLNFNAGNTG-GSLFG---NTAKPGGGLFGGGTTTLGGTGAAPTGGLFGGGTTSFGGVG 557
Fly 558 GSLGGGGFGMGTN-------------------NSLTGGIMGA-----QPT-LGIMTPSHQPIHQQ 597
Fly 598 ILARVTSPYGDS------PIFK-DLKLSSEADATRATNPAAQQAVLDLTSNQYKISTSNNPAPMK 655
Fly 656 VKALGSTLNRKSLFDGLEEFDASVEGFNLKPSAKRLVIKPKVKSVEGGNPSSSIGSAPNTPQSRP 720
Fly 721 K-----------GATPNKERE---SFSGAI--PSEPLPPAG 745 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup98-96 | NP_001262885.1 | Nucleoporin_FG | 395..481 | CDD:316182 | 18/85 (21%) |
Nucleoporin2 | 888..1027 | CDD:309287 | |||
Nup96 | 1484..1762 | CDD:314912 | |||
Nucleoporin_FG | <1..74 | CDD:316182 | 5/25 (20%) | ||
Nucleoporin_FG | 50..164 | CDD:316182 | 31/116 (27%) | ||
Nucleoporin_FG | 254..318 | CDD:316182 | 17/66 (26%) | ||
NupH_GANP | 316..>522 | CDD:318883 | 54/210 (26%) | ||
AT1G63540 | NP_176542.1 | KAR9 | <359..589 | CDD:285747 | 70/304 (23%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23198 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |